chr5.CM0909.750.nc (Lotus japonicus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 chr5.CM0909.750.nc T299411_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.915 0.816
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.915 0.816
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.CM0909.750.nc NAC/NAM 51 177

Links

Other NAC/NAM family TFs
Other Lotus japonicus TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
0200010383 Ostreococcus tauri 0200010383 N 0.000
30024.m001687 Ricinus communis 30024.m001687 N 0.000
RKD4 Arabidopsis thaliana AT5G53040 N 0.000
Bo9g108730 Brassica oleracea Bo9g108730 N 0.000
Bostr.26833s0978 Boechera stricta Bostr.26833s0978 N 0.000
Bra022622 Brassica rapa Bra022622 N 0.000
Ca_03992 Cicer arietinum Ca_03992 N 0.000
chr1.CM0033.310.nc Lotus japonicus chr1.CM0033.310.nc N 0.000
chr1.CM0033.320.nc Lotus japonicus chr1.CM0033.320.nc N 0.000
chr1.CM0033.390.nc Lotus japonicus chr1.CM0033.390.nc N 0.000
chr4.CM0131.310.nd Lotus japonicus chr4.CM0131.310.nd N 0.000
Cla004331 Citrullus lanatus Cla004331 N 0.000
Cla019404 Citrullus lanatus Cla019404 I 0.000
Cucsa.032230 Cucumis sativus Cucsa.032230 N 0.000
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.000
fgenesh1_pg.C_scaffold_2001738 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001738 I 0.000
fgenesh1_pm.C_scaffold_8001005 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001005 N 0.000
GLYMA04G41320 Glycine max GLYMA04G41320 N 0.000
GLYMA06G13540 Glycine max GLYMA06G13540 N 0.000
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.000
Gorai.008G193400 Gossypium raimondii Gorai.008G193400 I 0.000
Lus10005921.g Linum usitatissimum Lus10005921.g N 0.000
Lus10019100.g Linum usitatissimum Lus10019100.g I 0.000
Lus10034456.g Linum usitatissimum Lus10034456.g I 0.000
MDP0000141137 Malus domestica MDP0000141137 N 0.000
MDP0000261199 Malus domestica MDP0000261199 I 0.000
MDP0000266172 Malus domestica MDP0000266172 I 0.000
mgf025545m Mimulus guttatus mgf025545m N 0.000
orange1.1g036926m.g Citrus sinensis orange1.1g036926m.g I 0.000
PDK_20s1788591g001 Phoenix dactylifera PDK_20s1788591g001 N 0.000
Pm019768 Prunus mume Pm019768 N 0.000
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N 0.000
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.000
SapurV1A.0498s0250 Salix purpurea SapurV1A.0498s0250 N 0.000
TCM_014009 Theobroma cacao TCM_014009 I 0.000
TCM_015430 Theobroma cacao TCM_015430 N 0.000
Thhalv10019554m.g Eutrema salsugineum Thhalv10019554m.g I 0.000
Traes_6BL_301505440 Triticum aestivum Traes_6BL_301505440 I 0.000