CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG01395
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG01395
T301439_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG01395
Nuclear receptor
4
73
SKCAICLGVGDGFHFGAEACKACTAFFRRCIQLKKTFQCRGNANCDVTMGVRCICRACRFSKCLQAGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29917.m002016
Ricinus communis
29917.m002016
I
0.000
anac044
Arabidopsis lyrata
Al_scaffold_0003_51
N
0.000
AMTR_s00060p00054700
Amborella trichopoda
AMTR_s00060p00054700
I
0.000
Aquca_054_00006
Aquilegia coerulea
Aquca_054_00006
I
0.000
anac044
Arabidopsis thaliana
AT3G01600
N
0.000
anac085
Arabidopsis thaliana
AT5G14490
I
0.000
BGIOSGA006133
Oryza indica
BGIOSGA006133
N
0.000
BGIOSGA018654
Oryza indica
BGIOSGA018654
I
0.000
Bostr.1460s0050
Boechera stricta
Bostr.1460s0050
N
0.000
Bostr.2902s0186
Boechera stricta
Bostr.2902s0186
I
0.000
Bra001000
Brassica rapa
Bra001000
N
0.000
Bra006257
Brassica rapa
Bra006257
I
0.000
BRADI1G43840
Brachypodium distachyon
BRADI1G43840
I
0.000
BRADI3G47627
Brachypodium distachyon
BRADI3G47627
I
0.000
Cagra.1561s0026
Capsella grandiflora
Cagra.1561s0026
N
0.000
Cagra.3166s0054
Capsella grandiflora
Cagra.3166s0054
I
0.000
Carubv10002665m.g
Capsella rubella
Carubv10002665m.g
I
0.000
Carubv10014004m.g
Capsella rubella
Carubv10014004m.g
N
0.000
cassava14633.m1
Manihot esculenta
cassava14633.m1
I
0.000
cassava3690.m1
Manihot esculenta
cassava3690.m1
I
0.000
Ca_23230
Cicer arietinum
Ca_23230
N
0.000
chr1.CM0001.370.nd
Lotus japonicus
chr1.CM0001.370.nd
N
0.000
chr2.CM0749.410.nc
Lotus japonicus
chr2.CM0749.410.nc
I
0.000
Ciclev10015507m.g
Citrus clementina
Ciclev10015507m.g
I
0.000
Cla004701
Citrullus lanatus
Cla004701
I
0.000
Cucsa.011210
Cucumis sativus
Cucsa.011210
I
0.000
Eucgr.J02254
Eucalyptus grandis
Eucgr.J02254
I
0.000
F775_30638
Aegilops tauschii
F775_30638
I
0.000
gene27940-v1.0-hybrid
Fragaria vesca
gene27940-v1.0-hybrid
I
0.000
GLYMA01G22510
Glycine max
GLYMA01G22510
I
0.000
GLYMA02G11140
Glycine max
GLYMA02G11140
I
0.000
GLYMA05G09110
Glycine max
GLYMA05G09110
I
0.000
GLYMA16G07501
Glycine max
GLYMA16G07501
N
0.000
GLYMA19G00640
Glycine max
GLYMA19G00640
N
0.000
GLYMA19G08510
Glycine max
GLYMA19G08510
N
0.000
GLYMA20G32690
Glycine max
GLYMA20G32690
I
0.000
Gorai.006G034600
Gossypium raimondii
Gorai.006G034600
I
0.000
Gorai.007G075300
Gossypium raimondii
Gorai.007G075300
I
0.000
GRMZM2G038073
Zea mays
GRMZM2G038073
N
0.000
GRMZM2G104078
Zea mays
GRMZM2G104078
N
0.000
GSMUA_Achr2G16590_001
Musa acuminata
GSMUA_Achr2G16590_001
I
0.000
GSMUA_Achr3G07330_001
Musa acuminata
GSMUA_Achr3G07330_001
I
0.000
GSMUA_Achr7G09510_001
Musa acuminata
GSMUA_Achr7G09510_001
I
0.000
GSMUA_Achr9G01880_001
Musa acuminata
GSMUA_Achr9G01880_001
I
0.000
GSMUA_AchrUn_randomG17050_001
Musa acuminata
GSMUA_AchrUn_randomG17050_001
I
0.000
LPERR02G18380
Leersia perrieri
LPERR02G18380
N
0.000
LPERR05G05170
Leersia perrieri
LPERR05G05170
I
0.000
Lus10021708.g
Linum usitatissimum
Lus10021708.g
I
0.000
MDP0000283975
Malus domestica
MDP0000283975
N
0.000
MDP0000663564
Malus domestica
MDP0000663564
I
0.000
mgf018486m
Mimulus guttatus
mgf018486m
I
0.000
MTR_1g093670
Medicago truncatula
MTR_1g093670
I
0.000
MTR_7g033320
Medicago truncatula
MTR_7g033320
I
0.000
OB02G30060
Oryza brachyantha
OB02G30060
N
0.000
OB06G19430
Oryza brachyantha
OB06G19430
I
0.000
OBART02G22660
Oryza barthii
OBART02G22660
N
0.000
OBART05G06140
Oryza barthii
OBART05G06140
I
0.000
OBART06G10240
Oryza barthii
OBART06G10240
I
0.000
OGLUM02G22980
Oryza glumaepatula
OGLUM02G22980
N
0.000
OGLUM05G06420
Oryza glumaepatula
OGLUM05G06420
I
0.000
OGLUM06G11140
Oryza glumaepatula
OGLUM06G11140
I
0.000
OLONG_017685
Oryza longistaminata
OLONG_017685
I
0.000
OLONG_021085
Oryza longistaminata
OLONG_021085
I
0.000
OLONG_021848
Oryza longistaminata
OLONG_021848
N
0.000
OMERI02G22200
Oryza meridionalis
OMERI02G22200
N
0.000
OMERI06G11940
Oryza meridionalis
OMERI06G11940
I
0.000
ONIVA02G25300
Oryza nivara
ONIVA02G25300
N
0.000
ONIVA05G06750
Oryza nivara
ONIVA05G06750
I
0.000
ONIVA06G11950
Oryza nivara
ONIVA06G11950
I
0.000
OPUNC02G20570
Oryza punctata
OPUNC02G20570
N
0.000
OPUNC06G09830
Oryza punctata
OPUNC06G09830
I
0.000
ORGLA02G0193300
Oryza glaberrima
ORGLA02G0193300
N
0.000
ORGLA05G0055000
Oryza glaberrima
ORGLA05G0055000
I
0.000
ORGLA06G0096700
Oryza glaberrima
ORGLA06G0096700
I
0.000
ORUFI02G23890
Oryza rufipogon
ORUFI02G23890
N
0.000
ORUFI05G06530
Oryza rufipogon
ORUFI05G06530
I
0.000
ORUFI06G10770
Oryza rufipogon
ORUFI06G10770
I
0.000
OS02G0594800
Oryza sativa
OS02G0594800
N
0.000
OS05G0194500
Oryza sativa
OS05G0194500
I
0.000
Pavir.Aa01341
Panicum virgatum
Pavir.Aa01341
I
0.000
Pavir.Ab02181
Panicum virgatum
Pavir.Ab02181
I
0.000
Pavir.Ab02919
Panicum virgatum
Pavir.Ab02919
I
0.000
Pavir.Da01643
Panicum virgatum
Pavir.Da01643
I
0.000
Pavir.Db01100
Panicum virgatum
Pavir.Db01100
I
0.000
PDK_20s1306131g001
Phoenix dactylifera
PDK_20s1306131g001
I
0.000
PDK_20s1381351g001
Phoenix dactylifera
PDK_20s1381351g001
I
0.000
PGSC0003DMG400012607
Solanum tuberosum
PGSC0003DMG400012607
I
0.000
PK17141.1
Cannabis sativa
PK17141.1
I
0.000
Pm015625
Prunus mume
Pm015625
I
0.000
POPTR_0001s35490
Populus trichocarpa
POPTR_0001s35490
I
0.000
PRUPE_ppa006948mg
Prunus persica
PRUPE_ppa006948mg
I
0.000
SapurV1A.0079s0500
Salix purpurea
SapurV1A.0079s0500
I
0.000
SapurV1A.0304s0050
Salix purpurea
SapurV1A.0304s0050
I
0.000
SapurV1A.0716s0010
Salix purpurea
SapurV1A.0716s0010
I
0.000
SapurV1A.1388s0020
Salix purpurea
SapurV1A.1388s0020
I
0.000
SapurV1A.2846s0020
Salix purpurea
SapurV1A.2846s0020
I
0.000
Si006639m.g
Setaria italica
Si006639m.g
I
0.000
Si012740m.g
Setaria italica
Si012740m.g
N
0.000
Si017393m.g
Setaria italica
Si017393m.g
I
0.000
Si024889m.g
Setaria italica
Si024889m.g
I
0.000
Solyc02g093420.2
Solanum lycopersicum
Solyc02g093420.2
I
0.000
TCM_016984
Theobroma cacao
TCM_016984
I
0.000
Thhalv10022099m.g
Eutrema salsugineum
Thhalv10022099m.g
N
0.000
Traes_6AL_C14335DC8
Triticum aestivum
Traes_6AL_C14335DC8
I
0.000
Traes_6BL_B27806C89
Triticum aestivum
Traes_6BL_B27806C89
I
0.000
Traes_6DL_2F3586557
Triticum aestivum
Traes_6DL_2F3586557
I
0.000
Traes_7AS_6E6A5CD04
Triticum aestivum
Traes_7AS_6E6A5CD04
I
0.000
Traes_7BS_99BF8BA2F
Triticum aestivum
Traes_7BS_99BF8BA2F
I
0.000
Traes_7DS_78B5508C0
Triticum aestivum
Traes_7DS_78B5508C0
I
0.000
TRIUR3_21992
Triticum urartu
TRIUR3_21992
I
0.000
VIT_14s0066g00360
Vitis vinifera
VIT_14s0066g00360
I
0.000