CBN18082 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN18082 T301789_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.755 0.514
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.755 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN18082 Nuclear receptor 28 99

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG01233 Caenorhabditis briggsae CBG01233 N 0.991
CBG01234 Caenorhabditis briggsae CBG01234 N 0.987
CBG06387 Caenorhabditis briggsae CBG06387 I 0.780
CBN00299 Caenorhabditis brenneri CBN00299 I 0.766
CBN21664 Caenorhabditis brenneri CBN21664 N 0.752
CJA19466 Caenorhabditis japonica CJA19466 I 0.748
CRE08749 Caenorhabditis remanei CRE08749 I 0.877
CRE08750 Caenorhabditis remanei CRE08750 N 0.983
CRE08755 Caenorhabditis remanei CRE08755 I 0.746
CRE14846 Caenorhabditis remanei CRE14846 I 0.753
CRE18699 Caenorhabditis remanei CRE18699 I 0.836
nhr-55 Caenorhabditis elegans WBGene00003645 I 0.842
nhr-59 Caenorhabditis elegans WBGene00003649 I 0.982
nhr-125 Caenorhabditis elegans WBGene00003715 I 0.861
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.755
nhr-143 Caenorhabditis elegans WBGene00019116 I 0.757
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.784
nhr-202 Caenorhabditis elegans WBGene00019742 I 0.814
nhr-203 Caenorhabditis elegans WBGene00019743 N 0.779
WBGene00020591 Caenorhabditis elegans WBGene00020591 N 0.828
nhr-275 Caenorhabditis elegans WBGene00021163 N 0.949