CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AAA75575
(
Xenopus laevis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
AAA75575
T307071_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NR3C2
M02395_2.00
Homo sapiens
NNRGDACAN
NTGTHCYNN
PBM
Weirauch et al.(2014)
pTH5924
0.989
0.943
NR3C2
M03382_2.00
Homo sapiens
NRGDACAHDRTGTHCYN
NRGDACAYHDTGTHCYN
SELEX
Jolma et al.(2013)
NR3C2_1
0.989
0.943
NR3C2
M05637_2.00
Homo sapiens
NGNACRNNNYGTNCN
NGNACRNNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_HT-SELEX
0.989
0.943
NR3C2
M05638_2.00
Homo sapiens
NGNACRNNVYGTNCN
NGNACRBNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_Methyl-HT-SELEX
0.989
0.943
Nr3c1
M05886_2.00
Mus musculus
DGDACDBYNTGTNCY
RGNACANRVHGTHCH
SMiLE-seq
Isakova et al.(2017)
GR
0.985
0.886
Nr3c1
M09318_2.00
Mus musculus
RGNACABYNTGTNCY
RGNACANRVTGTNCY
Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A
0.985
0.886
Nr3c1
M09614_2.00
Mus musculus
NRGDACABNNTGTNC
GNACANNVTGTHCYN
Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished
0.985
0.886
NR3C1
M03366_2.00
Homo sapiens
NRGWACAYNRTGTWCYH
DRGWACAYNRTGTWCYN
SELEX
Jolma et al.(2013)
NR3C1_1
0.984
0.886
NR3C1
M05587_2.00
Homo sapiens
RGDACAYWDTGTHCY
RGDACAHWRTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX
0.984
0.886
NR3C1
M07986_2.00
Homo sapiens
DGNACABYBTGTNC
GNACAVRVTGTNCH
ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha
0.984
0.886
NR3C1
M07987_2.00
Homo sapiens
NNNNRGNACAYBBTGTHCYNN
NNRGDACAVVRTGTNCYNNNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha
0.984
0.886
NR3C1
M09270_2.00
Homo sapiens
DGNACABKNTGTNCY
RGNACANMVTGTNCH
Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A
0.984
0.886
NR3C1
M09607_2.00
Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
A549-GR_GSE32465
0.984
0.886
NR3C1
M11119_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_01
0.984
0.886
NR3C1
M11120_2.00
Homo sapiens
KKYACMRDVTGTYCTK
MAGRACABHYKGTRMM
Transfac
Matys et al.(2006)
V$GRE_C
0.984
0.886
NR3C1
M11121_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q4
0.984
0.886
NR3C1
M11122_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_01
0.984
0.886
NR3C1
M11123_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_02
0.984
0.886
NR3C1
M11124_2.00
Homo sapiens
NNWGVACANWDNNDNBHNN
NNDVNHNNHWNTGTBCWNN
Transfac
Matys et al.(2006)
V$GR_Q6
0.984
0.886
NR3C1
M11125_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR3C1_04
0.984
0.886
NR3C1
M05588_2.00
Homo sapiens
RGDACANDRYGTHCY
RGDACRYHNTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX
0.984
0.886
PGR
M03923_2.00
Homo sapiens
DGNACANNNYGTNCY
RGNACRNNNTGTNCH
SELEX
Nitta et al.(2015)
PGR_1
0.982
0.843
PGR
M09266_2.00
Homo sapiens
RGNACWBYBTGTNCYN
NRGNACAVRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_HUMAN.H11MO.0.A
0.982
0.843
Pgr
M09326_2.00
Mus musculus
RGNACWBYNTGTNCY
RGNACANRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_MOUSE.H11MO.0.A
0.982
0.843
PGR
M09603_2.00
Homo sapiens
RNACWNNNWGTNCHN
NDGNACWNNNWGTNY
Misc
Heinz et al.(2010)
T47D-PR_GSE31130
0.982
0.843
PGR
M11095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_01
0.982
0.843
PGR
M11096_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_02
0.982
0.843
PGR
M11097_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_Q6
0.982
0.843
Ar
M00821_2.00
Mus musculus
NRRGAACAYN
NRTGTTCYYN
PBM
Weirauch et al.(2013)
pTH1739
0.971
0.786
AR
M03389_2.00
Homo sapiens
DRGWACRHVDYGTWCCY
RGGWACRHBDYGTWCYH
SELEX
Jolma et al.(2013)
AR_1
0.971
0.786
AR
M03390_2.00
Homo sapiens
DRGWACAYNRTGTWCYY
RRGWACAYNRTGTWCYH
SELEX
Jolma et al.(2013)
AR_2
0.971
0.786
Ar
M03436_2.00
Mus musculus
NRGHACAYNVYGTWCYN
NRGWACRBNRTGTDCYN
SELEX
Jolma et al.(2013)
Ar_1
0.971
0.786
AR
M09288_2.00
Homo sapiens
DRYAAAYADNNNRGNACA
TGTNCYNNNHTRTTTRYH
Misc
Kulakovskiy et al.(2013)
ANDR_HUMAN.H11MO.0.A
0.971
0.786
Ar
M09331_2.00
Mus musculus
NRGNACABRVTGTNCY
RGNACABYVTGTNCYN
Misc
Kulakovskiy et al.(2013)
ANDR_MOUSE.H11MO.0.A
0.971
0.786
AR
M09610_2.00
Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
LNCAP-AR_GSE27824
0.971
0.786
AR
M09609_2.00
Homo sapiens
SHDRGVACAS
STGTBCYHDS
Misc
Heinz et al.(2010)
LNCaP-AR_GSE27824
0.971
0.786
AR
M11157_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_01
0.971
0.786
AR
M11158_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_02
0.971
0.786
AR
M11159_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_03
0.971
0.786
AR
M11160_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_04
0.971
0.786
AR
M11161_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_11
0.971
0.786
AR
M11162_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_13
0.971
0.786
AR
M11163_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_14_H
0.971
0.786
AR
M11164_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q2
0.971
0.786
AR
M11165_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q6_01
0.971
0.786
AR
M11166_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q6
0.971
0.786
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAA75575
Nuclear receptor
9
82
KVCLVCGDEASGCHYGVVTCGSCKVFFKRAVEGKCSRQHSYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNL
Links
Other
Nuclear receptor
family TFs
Other
Xenopus laevis
TFs
271 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00158.1
Alternaria brassicicola
AB00158.1
I
AOL_s00080g113
Arthrobotrys oligospora
AOL_s00080g113
I
AUEXF2481DRAFT_639986
Aureobasidium subglaciale
AUEXF2481DRAFT_639986
N
BAUCODRAFT_101870
Baudoinia compniacensis
BAUCODRAFT_101870
N
BBA_00880
Beauveria bassiana
BBA_00880
N
Bcin05g07910
Botrytis cinerea
Bcin05g07910
I
BGHDH14_bgh03482
Blumeria graminis
BGHDH14_bgh03482
I
CCM_02840
Cordyceps militaris
CCM_02840
N
CFIO01_09638
Colletotrichum fioriniae
CFIO01_09638
N
CGGC5_10888
Colletotrichum gloeosporioides
CGGC5_10888
N
CH063_01061
Colletotrichum higginsianum
CH063_01061
N
CHGG_02115
Chaetomium globosum
CHGG_02115
N
CMQ_423
Grosmannia clavigera
CMQ_423
I
Cob_07214
Colletotrichum orbiculare
Cob_07214
N
COCC4DRAFT_156048
Bipolaris maydis
COCC4DRAFT_156048
I
COCCADRAFT_94279
Bipolaris zeicola
COCCADRAFT_94279
I
COCMIDRAFT_80931
Bipolaris oryzae
COCMIDRAFT_80931
I
COCSADRAFT_166678
Bipolaris sorokiniana
COCSADRAFT_166678
I
COCVIDRAFT_83730
Bipolaris victoriae
COCVIDRAFT_83730
I
CPUR_07537
Claviceps purpurea
CPUR_07537
N
CSUB01_01308
Colletotrichum sublineola
CSUB01_01308
N
CTHT_0074660
Chaetomium thermophilum
CTHT_0074660
N
DOTSEDRAFT_70721
Dothistroma septosporum
DOTSEDRAFT_70721
N
DRE_01490
Drechslerella stenobrocha
DRE_01490
I
estExt_Genewise1.C_40474
Neurospora discreta
estExt_Genewise1.C_40474
N
e_gw1.2.33.1
Cochliobolus heterostrophus C5
e_gw1.2.33.1
I
e_gw1.4.1073.1
Cryphonectria parasitica
e_gw1.4.1073.1
N
e_gw1.43.151.1
Nectria haematococca
e_gw1.43.151.1
N
F503_07581
Ophiostoma piceae uamh
F503_07581
N
FFUJ_03889
Fusarium fujikuroi
FFUJ_03889
N
FGRRES_04888_M
Fusarium graminearum
FGRRES_04888_M
N
FOXG_05736
Fusarium oxysporum
FOXG_05736
N
FPSE_03993
Fusarium pseudograminearum
FPSE_03993
N
FVEG_03609
Fusarium verticillioides
FVEG_03609
N
GGTG_08847
Gaeumannomyces graminis
GGTG_08847
I
GLRG_08586
Colletotrichum graminicola
GLRG_08586
N
GMDG_07325
Pseudogymnoascus destructans
GMDG_07325
I
gw1.1.2293.1
Mycosphaerella graminicola
gw1.1.2293.1
N
H072_11612
Dactylellina haptotyla
H072_11612
I
HMPREF1624_08770
Sporothrix schenckii
HMPREF1624_08770
I
LEMA_P068880.1
Leptosphaeria maculans
LEMA_P068880.1
I
M437DRAFT_41048
Aureobasidium melanogenum
M437DRAFT_41048
N
M438DRAFT_358845
Aureobasidium pullulans
M438DRAFT_358845
N
MAC_06594
Metarhizium acridum
MAC_06594
N
MAJ_09939
Metarhizium majus
MAJ_09939
N
MAM_07566
Metarhizium album
MAM_07566
N
MANI_002894
Metarhizium anisopliae
MANI_002894
N
MBR_08627
Metarhizium brunneum
MBR_08627
N
MGG_17669
Magnaporthe oryzae
MGG_17669
I
MGU_07939
Metarhizium guizhouense
MGU_07939
N
MPH_02048
Macrophomina phaseolina
MPH_02048
I
MPH_09774
Macrophomina phaseolina
MPH_09774
I
MYCFIDRAFT_137203
Pseudocercospora fijiensis
MYCFIDRAFT_137203
N
Mycgr3G21814
Zymoseptoria tritici
Mycgr3G21814
N
MYCTH_2307849
Myceliophthora thermophila
MYCTH_2307849
I
NCU02934
Neurospora crassa
NCU02934
I
NechaG49659
Fusarium solani
NechaG49659
N
NEUTE1DRAFT_92544
Neurospora tetrasperma
NEUTE1DRAFT_92544
I
OIDMADRAFT_203117
Oidiodendron maius
OIDMADRAFT_203117
I
PFICI_02612
Pestalotiopsis fici
PFICI_02612
N
PODANS_1_900
Podospora anserina
PODANS_1_900
N
PTRG_10684
Pyrenophora triticirepentis
PTRG_10684
I
PTT_14070
Pyrenophora teres
PTT_14070
I
SAPIO_CDS1259
Scedosporium apiospermum
SAPIO_CDS1259
I
SBOR_9682
Sclerotinia borealis
SBOR_9682
I
SEPMUDRAFT_148074
Sphaerulina musiva
SEPMUDRAFT_148074
N
SETTUDRAFT_41285
Setosphaeria turcica
SETTUDRAFT_41285
I
SMAC_00514
Sordaria macrospora
SMAC_00514
I
SNOG_09792
Phaeosphaeria nodorum
SNOG_09792
I
SNOG_09792
Stagonospora nodorum
SNOG_09792
I
SPBR_02251
Sporothrix brasiliensis
SPBR_02251
I
THITE_2120534
Thielavia terrestris
THITE_2120534
I
UCRNP2_6692
Neofusicoccum parvum
UCRNP2_6692
I
UV8b_6675
Ustilaginoidea virens
UV8b_6675
N
V499_01314
Pseudogymnoascus pannorum
V499_01314
I
VDBG_09923
Verticillium alfalfae
VDBG_09923
N
VDBG_09923
Verticillium albo atrum
VDBG_09923
N
VHEMI09842
Torrubiella hemipterigena
VHEMI09842
N
W97_07671
Coniosporium apollinis
W97_07671
I
X797_008200
Metarhizium robertsii
X797_008200
N