ar (Xenopus tropicalis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 XB-GENE-479429 T307251_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ar
M00821_2.00 		Mus musculus
NRRGAACAYN
NRTGTTCYYN		 PBM
Weirauch et al.(2013)
pTH1739 		0.992 1.000
AR
M03389_2.00 		Homo sapiens
DRGWACRHVDYGTWCCY
RGGWACRHBDYGTWCYH		 SELEX
Jolma et al.(2013)
AR_1 		0.992 1.000
AR
M03390_2.00 		Homo sapiens
DRGWACAYNRTGTWCYY
RRGWACAYNRTGTWCYH		 SELEX
Jolma et al.(2013)
AR_2 		0.992 1.000
Ar
M03436_2.00 		Mus musculus
NRGHACAYNVYGTWCYN
NRGWACRBNRTGTDCYN		 SELEX
Jolma et al.(2013)
Ar_1 		0.992 1.000
AR
M09288_2.00 		Homo sapiens
DRYAAAYADNNNRGNACA
TGTNCYNNNHTRTTTRYH		 Misc
Kulakovskiy et al.(2013)
ANDR_HUMAN.H11MO.0.A 		0.992 1.000
Ar
M09331_2.00 		Mus musculus
NRGNACABRVTGTNCY
RGNACABYVTGTNCYN		 Misc
Kulakovskiy et al.(2013)
ANDR_MOUSE.H11MO.0.A 		0.992 1.000
AR
M09610_2.00 		Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN		 Misc
Heinz et al.(2010)
LNCAP-AR_GSE27824 		0.992 1.000
AR
M09609_2.00 		Homo sapiens
SHDRGVACAS
STGTBCYHDS		 Misc
Heinz et al.(2010)
LNCaP-AR_GSE27824 		0.992 1.000
AR
M11157_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_01 		0.992 1.000
AR
M11158_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_02 		0.992 1.000
AR
M11159_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_03 		0.992 1.000
AR
M11160_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_04 		0.992 1.000
AR
M11161_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_11 		0.992 1.000
AR
M11162_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_13 		0.992 1.000
AR
M11163_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_14_H 		0.992 1.000
AR
M11164_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q2 		0.992 1.000
AR
M11165_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q6_01 		0.992 1.000
AR
M11166_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q6 		0.992 1.000
NR3C1
M03366_2.00 		Homo sapiens
NRGWACAYNRTGTWCYH
DRGWACAYNRTGTWCYN		 SELEX
Jolma et al.(2013)
NR3C1_1 		0.978 0.786
NR3C1
M05587_2.00 		Homo sapiens
RGDACAYWDTGTHCY
RGDACAHWRTGTHCY		 SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX 		0.978 0.786
NR3C1
M07986_2.00 		Homo sapiens
DGNACABYBTGTNC
GNACAVRVTGTNCH		 ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha 		0.978 0.786
NR3C1
M07987_2.00 		Homo sapiens
NNNNRGNACAYBBTGTHCYNN
NNRGDACAVVRTGTNCYNNNN		 ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha 		0.978 0.786
NR3C1
M09270_2.00 		Homo sapiens
DGNACABKNTGTNCY
RGNACANMVTGTNCH		 Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A 		0.978 0.786
NR3C1
M09607_2.00 		Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN		 Misc
Heinz et al.(2010)
A549-GR_GSE32465 		0.978 0.786
NR3C1
M11119_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_01 		0.978 0.786
NR3C1
M11120_2.00 		Homo sapiens
KKYACMRDVTGTYCTK
MAGRACABHYKGTRMM		 Transfac
Matys et al.(2006)
V$GRE_C 		0.978 0.786
NR3C1
M11121_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q4 		0.978 0.786
NR3C1
M11122_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q6_01 		0.978 0.786
NR3C1
M11123_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q6_02 		0.978 0.786
NR3C1
M11124_2.00 		Homo sapiens
NNWGVACANWDNNDNBHNN
NNDVNHNNHWNTGTBCWNN		 Transfac
Matys et al.(2006)
V$GR_Q6 		0.978 0.786
NR3C1
M11125_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR3C1_04 		0.978 0.786
NR3C1
M05588_2.00 		Homo sapiens
RGDACANDRYGTHCY
RGDACRYHNTGTHCY		 SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX 		0.978 0.786
PGR
M03923_2.00 		Homo sapiens
DGNACANNNYGTNCY
RGNACRNNNTGTNCH		 SELEX
Nitta et al.(2015)
PGR_1 		0.977 0.800
PGR
M09266_2.00 		Homo sapiens
RGNACWBYBTGTNCYN
NRGNACAVRVWGTNCY		 Misc
Kulakovskiy et al.(2013)
PRGR_HUMAN.H11MO.0.A 		0.977 0.800
Pgr
M09326_2.00 		Mus musculus
RGNACWBYNTGTNCY
RGNACANRVWGTNCY		 Misc
Kulakovskiy et al.(2013)
PRGR_MOUSE.H11MO.0.A 		0.977 0.800
PGR
M09603_2.00 		Homo sapiens
RNACWNNNWGTNCHN
NDGNACWNNNWGTNY		 Misc
Heinz et al.(2010)
T47D-PR_GSE31130 		0.977 0.800
PGR
M11095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_01 		0.977 0.800
PGR
M11096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_02 		0.977 0.800
PGR
M11097_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_Q6 		0.977 0.800
NR3C2
M02395_2.00 		Homo sapiens
NNRGDACAN
NTGTHCYNN		 PBM
Weirauch et al.(2014)
pTH5924 		0.974 0.771
NR3C2
M03382_2.00 		Homo sapiens
NRGDACAHDRTGTHCYN
NRGDACAYHDTGTHCYN		 SELEX
Jolma et al.(2013)
NR3C2_1 		0.974 0.771
NR3C2
M05637_2.00 		Homo sapiens
NGNACRNNNYGTNCN
NGNACRNNNYGTNCN		 SELEX
Yin et al.(2017)
NR3C2_eDBD_HT-SELEX 		0.974 0.771
NR3C2
M05638_2.00 		Homo sapiens
NGNACRNNVYGTNCN
NGNACRBNNYGTNCN		 SELEX
Yin et al.(2017)
NR3C2_eDBD_Methyl-HT-SELEX 		0.974 0.771
Nr3c1
M05886_2.00 		Mus musculus
DGDACDBYNTGTNCY
RGNACANRVHGTHCH		 SMiLE-seq
Isakova et al.(2017)
GR 		0.974 0.771
Nr3c1
M09318_2.00 		Mus musculus
RGNACABYNTGTNCY
RGNACANRVTGTNCY		 Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A 		0.974 0.771
Nr3c1
M09614_2.00 		Mus musculus
NRGDACABNNTGTNC
GNACANNVTGTHCYN		 Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished 		0.974 0.771
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002941888 Nuclear receptor 19 88

Links

Other Nuclear receptor family TFs
Other Xenopus tropicalis TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13440_YKL062W Saccharomyces mikatae 13440_YKL062W I 0.000
13715_YKL062W Saccharomyces paradoxus 13715_YKL062W I 0.000
14538_YKL062W Saccharomyces bayanus 14538_YKL062W I 0.000
16548_YMR037C Saccharomyces mikatae 16548_YMR037C I 0.000
17169_YMR037C Saccharomyces paradoxus 17169_YMR037C I 0.000
17588_YMR037C Saccharomyces bayanus 17588_YMR037C I 0.000
AACERI_AaceriABR089C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR089C I 0.000
AGOS_ABR089C Ashbya gossypii AGOS_ABR089C I 0.000
BN7_2125 Wickerhamomyces ciferrii BN7_2125 I 0.000
CAGL0F05995g Candida glabrata CAGL0F05995g D 0.000
CAGL0M13189g Candida glabrata CAGL0M13189g D 0.000
CANTEDRAFT_134781 Candida tenuis CANTEDRAFT_134781 I 0.000
CLUG_01356 Clavispora lusitaniae CLUG_01356 I 0.000
CLUG_01356 Candida lusitaniae CLUG_01356 I 0.000
DEHA2A08382g Debaryomyces hansenii DEHA2A08382g I 0.000
Ecym_2301 Eremothecium cymbalariae Ecym_2301 I 0.000
fgenesh1_pg.C_chr_7.1000062 Pichia stipitis fgenesh1_pg.C_chr_7.1000062 I 0.000
GLOINDRAFT_82623 Rhizophagus irregularis GLOINDRAFT_82623 I 0.000
GNLVRS01_PISO0E05768g Millerozyma farinosa GNLVRS01_PISO0E05768g I 0.000
GNLVRS01_PISO0F07089g Millerozyma farinosa GNLVRS01_PISO0F07089g I 0.000
KAFR_0A02320 Kazachstania africana KAFR_0A02320 I 0.000
KAFR_0F02070 Kazachstania africana KAFR_0F02070 I 0.000
KLLA0_F26961g Kluyveromyces lactis KLLA0_F26961g D 0.000
KLTH0D08734g Kluyveromyces thermotolerans KLTH0D08734g I 0.000
KLTH0D08734g Lachancea thermotolerans KLTH0D08734g I 0.000
KNAG_0H00550 Kazachstania naganishii KNAG_0H00550 I 0.000
KNAG_0M02310 Kazachstania naganishii KNAG_0M02310 I 0.000
Kpol_1013p21 Vanderwaltozyma polyspora Kpol_1013p21 I 0.000
Kpol_185p3 Vanderwaltozyma polyspora Kpol_185p3 I 0.000
KUCA_T00000741001 Kuraishia capsulata KUCA_T00000741001 I 0.000
Kwal_8351 Kluyveromyces waltii Kwal_8351 I 0.000
LALA0_S09e05358g Lachancea lanzarotensis LALA0_S09e05358g I 0.000
NCAS_0A12910 Naumovozyma castellii NCAS_0A12910 I 0.000
NCAS_0H03080 Naumovozyma castellii NCAS_0H03080 I 0.000
NDAI_0B01340 Naumovozyma dairenensis NDAI_0B01340 I 0.000
NDAI_0C00560 Naumovozyma dairenensis NDAI_0C00560 I 0.000
PAS_chr2-1_0723 Komagataella pastoris PAS_chr2-1_0723 I 0.000
PGUG_01635 Candida guilliermondii PGUG_01635 I 0.000
PGUG_01635 Meyerozyma guilliermondii PGUG_01635 I 0.000
PICST_33273 Scheffersomyces stipitis PICST_33273 I 0.000
SAKL0B11330g Lachancea kluyveri SAKL0B11330g I 0.000
Scas_Contig649.28 Saccharomyces castellii Scas_Contig649.28 I 0.000
Scas_Contig649.29 Saccharomyces castellii Scas_Contig649.29 I 0.000
Scas_Contig709.32 Saccharomyces castellii Scas_Contig709.32 I 0.000
SKUD_158203 Saccharomyces kudriavzevii SKUD_158203 I 0.000
SU7_1995 Saccharomyces arboricola SU7_1995 I 0.000
SU7_2517 Saccharomyces arboricola SU7_2517 I 0.000
TBLA_0G01920 Tetrapisispora blattae TBLA_0G01920 I 0.000
TBLA_0H02830 Tetrapisispora blattae TBLA_0H02830 I 0.000
TDEL_0B06910 Torulaspora delbrueckii TDEL_0B06910 I 0.000
TPHA_0N01460 Tetrapisispora phaffii TPHA_0N01460 I 0.000
XP_002491652.1 Pichia pastoris XP_002491652.1 I 0.000
MSN4 Saccharomyces cerevisiae YKL062W D 0.000
MSN2 Saccharomyces cerevisiae YMR037C D 0.000
ZBAI_03527 Zygosaccharomyces bailii ZBAI_03527 I 0.000
ZBAI_08525 Zygosaccharomyces bailii ZBAI_08525 I 0.000
ZYRO0F01012g Zygosaccharomyces rouxii ZYRO0F01012g I 0.000