MDOA012160 (Musca domestica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 MDOA012160 T307844_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.988 0.929
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.988 0.929
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.988 0.929
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.988 0.929
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.988 0.929
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.988 0.929
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.988 0.929
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.984 0.900
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.982 0.886
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.982 0.886
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.982 0.886
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.959 0.814
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.959 0.814
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDOA012160-PA Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Musca domestica TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BPC4 Arabidopsis thaliana AT2G21240 N 0.000
BPC5 Arabidopsis thaliana AT4G38910 D 0.000
Bo4g145820 Brassica oleracea Bo4g145820 N 0.000
Bo7g119540 Brassica oleracea Bo7g119540 I 0.000
Bostr.25542s0071 Boechera stricta Bostr.25542s0071 I 0.000
Bostr.5022s0111 Boechera stricta Bostr.5022s0111 N 0.000
Bra030308 Brassica rapa Bra030308 N 0.000
Cagra.2961s0028 Capsella grandiflora Cagra.2961s0028 N 0.000
Carubv10023579m.g Capsella rubella Carubv10023579m.g N 0.000
BPC4 Arabidopsis lyrata fgenesh2_kg.4__42__AT2G21240.1 N 0.000
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I 0.000
scaffold_200704.1 Arabidopsis lyrata scaffold_200704.1 I 0.000
Thhalv10000273m.g Eutrema salsugineum Thhalv10000273m.g N 0.000
Thhalv10025867m.g Eutrema salsugineum Thhalv10025867m.g I 0.000