CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NECAME_01944
(
Necator americanus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
NECAME_01944
T309786_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.812
0.571
nhr-154
M00698_2.00
Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN
PBM
Narasimhan et al.(2015)
pTH10650
0.799
0.586
CBG23380
M01296_2.00
Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN
PBM
Lambert et al.(2019)
pTH11449
0.797
0.600
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NECAME_01944
Nuclear receptor
33
104
TTCAVCGDSASGYHYEVPSCNGCKTFFRRTVLAQRKYECKKGGNCFSSLPKDRRCSCRACRFQQCVAVGMNP
Links
Other
Nuclear receptor
family TFs
Other
Necator americanus
TFs
179 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_59593
Hordeum vulgare
MLOC_59593
N
Traes_4AL_884BA5746
Triticum aestivum
Traes_4AL_884BA5746
N
Traes_4DS_AE4107C25
Triticum aestivum
Traes_4DS_AE4107C25
N
TRIUR3_12876
Triticum urartu
TRIUR3_12876
N