CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0000134600
(
Parastrongyloides trichosuri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
PTRK_0000134600
T309995_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000134600.1
Nuclear receptor
14
83
KVCVVCGDNAFGTNFGVVSCESCKAFYRRNCLRENIIFCPFQRNCKITINSRRNCQACRLQKCIAVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Parastrongyloides trichosuri
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0001358501
Angiostrongylus cantonensis
ACAC_0001358501
I
0.800
ACEP16468
Atta cephalotes
ACEP16468
I
0.748
AFAF019254
Anopheles farauti
AFAF019254
I
0.746
BXY_1432000
Bursaphelenchus xylophilus
BXY_1432000
I
0.752
CBG07759
Caenorhabditis briggsae
CBG07759
I
0.800
CBN06351
Caenorhabditis brenneri
CBN06351
I
0.800
Cflo_03542--XP_624213.2_APIME
Camponotus floridanus
Cflo_03542--XP_624213.2_APIME
I
0.751
CJA03214
Caenorhabditis japonica
CJA03214
I
0.800
CJA16298
Caenorhabditis japonica
CJA16298
N
0.757
CRE19106
Caenorhabditis remanei
CRE19106
I
0.800
DAPPUDRAFT_303110
Daphnia pulex
DAPPUDRAFT_303110
I
0.765
DICVIV_03942
Dictyocaulus viviparus
DICVIV_03942
I
0.800
GB52904
Apis mellifera
GB52904
I
0.748
HCOI00283900
Haemonchus contortus
HCOI00283900
I
0.866
HCOI00567800
Haemonchus contortus
HCOI00567800
I
0.861
HCOI01526000
Haemonchus contortus
HCOI01526000
I
0.800
HmN_000196100
Hymenolepis microstoma
HmN_000196100
N
0.831
HPBE_0002060301
Heligmosomoides bakeri
HPBE_0002060301
I
0.749
Hsal_04850--XP_624213.2_APIME
Harpegnathos saltator
Hsal_04850--XP_624213.2_APIME
I
0.748
ISCW009328
Ixodes scapularis
ISCW009328
I
0.908
L596_g25556
Steinernema carpocapsae
L596_g25556
I
0.802
L596_g9326
Steinernema carpocapsae
L596_g9326
I
0.835
L889_g7248
Steinernema feltiae
L889_g7248
I
0.777
L892_g26350
Steinernema scapterisci
L892_g26350
I
0.835
L893_g3995
Steinernema glaseri
L893_g3995
I
0.796
L893_g8292
Steinernema glaseri
L893_g8292
I
0.831
L898_g1817
Steinernema monticolum
L898_g1817
I
0.835
L898_g23217
Steinernema monticolum
L898_g23217
I
0.789
MhA1_Contig1158.frz3.gene18
Meloidogyne hapla
MhA1_Contig1158.frz3.gene18
I
0.747
Minc13296
Meloidogyne incognita
Minc13296
I
0.747
Minc18589
Meloidogyne incognita
Minc18589
I
0.747
NECAME_01947
Necator americanus
NECAME_01947
I
0.800
NV10187
Nasonia vitripennis
NV10187
I
0.748
Ppa-nhr-8
Pristionchus pacificus
PPA17111
I
0.808
PPAI005921
Phlebotomus papatasi
PPAI005921
I
0.754
RSKR_0000789200
Rhabditophanes kr3021
RSKR_0000789200
I
0.848
scaffold889-EXSNAP2012.10
Pristionchus exspectatus
scaffold889-EXSNAP2012.10
I
0.784
SMUV_0000312501
Syphacia muris
SMUV_0000312501
I
0.872
SSTP_0001025500
Strongyloides stercoralis
SSTP_0001025500
N
0.913
SVE_0817200
Strongyloides venezuelensis
SVE_0817200
N
0.947
SVUK_0001112701
Strongylus vulgaris
SVUK_0001112701
I
0.800
TELCIR_04193
Teladorsagia circumcincta
TELCIR_04193
I
0.759
TELCIR_04889
Teladorsagia circumcincta
TELCIR_04889
I
0.800
nhr-48
Caenorhabditis elegans
WBGene00003638
I
0.800