HCOI00283900 (Haemonchus contortus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HCOI00283900 T308769_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
daf-12
M00685_2.00 		Caenorhabditis elegans
NDAGTRCANN
NNTGYACTHN		 PBM
Narasimhan et al.(2015)
pTH9108 		0.811 0.700
daf-12
M08159_2.00 		Caenorhabditis elegans
GWGYGYGYKTGYDKB
VMHRCAMRCRCRCWC		 ChIP-seq
Mathelier et al.(2014)
MA0538.1 		0.811 0.700
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00283900.t1 Nuclear receptor 54 123
HCOI00283900.t2 Nuclear receptor 54 123

Links

Other Nuclear receptor family TFs
Other Haemonchus contortus TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HCOI00567800 Haemonchus contortus HCOI00567800 I 0.991
TELCIR_04193 Teladorsagia circumcincta TELCIR_04193 I 0.983
ANCCAN_22289 Ancylostoma caninum ANCCAN_22289 I 0.980
HPBE_0002060301 Heligmosomoides bakeri HPBE_0002060301 I 0.979
CGOC_0001446101 Cylicostephanus goldi CGOC_0001446101 I 0.978
CBG05944 Caenorhabditis briggsae CBG05944 I 0.963
CRE05362 Caenorhabditis remanei CRE05362 I 0.962
CRE12534 Caenorhabditis remanei CRE12534 I 0.962
nhr-8 Caenorhabditis elegans WBGene00003607 I 0.961
CJA16298 Caenorhabditis japonica CJA16298 N 0.958
CBN28114 Caenorhabditis brenneri CBN28114 N 0.951
DICVIV_13447 Dictyocaulus viviparus DICVIV_13447 N 0.925
DICVIV_13314 Dictyocaulus viviparus DICVIV_13314 N 0.918
PTRK_0000134600 Parastrongyloides trichosuri PTRK_0000134600 N 0.866
SVE_0817200 Strongyloides venezuelensis SVE_0817200 N 0.848
L892_g18386 Steinernema scapterisci L892_g18386 I 0.817
ISCW009328 Ixodes scapularis ISCW009328 I 0.813
WUBG_12640 Wuchereria bancrofti WUBG_12640 I 0.811
CBG04512 Caenorhabditis briggsae CBG04512 I 0.811
CBN31767 Caenorhabditis brenneri CBN31767 I 0.811
CJA11532 Caenorhabditis japonica CJA11532 I 0.811
CRE07237 Caenorhabditis remanei CRE07237 I 0.811
LOAG_10538 Loa loa LOAG_10538 I 0.811
daf-12 Caenorhabditis elegans WBGene00000908 D 0.811
WBGene00239037 Onchocerca volvulus WBGene00239037 I 0.811
ACOC_0000064201 Angiostrongylus costaricensis ACOC_0000064201 I 0.811
ANCCAN_15412 Ancylostoma caninum ANCCAN_15412 I 0.811
ANCDUO_17434 Ancylostoma duodenale ANCDUO_17434 I 0.811
ASIM_0001146101 Anisakis simplex ASIM_0001146101 I 0.811
ASU_07898 Ascaris suum ASU_07898 I 0.811
BXY_1418300 Bursaphelenchus xylophilus BXY_1418300 I 0.811
DME_0000943901 Dracunculus medinensis DME_0000943901 I 0.811
EVEC_0001257601 Enterobius vermicularis EVEC_0001257601 I 0.811
L596_g8771 Steinernema carpocapsae L596_g8771 I 0.811
L889_g10853 Steinernema feltiae L889_g10853 I 0.811
L898_g10498 Steinernema monticolum L898_g10498 I 0.811
nDi.2.2.2.g09652 Dirofilaria immitis nDi.2.2.2.g09652 I 0.811
PTRK_0001378700 Parastrongyloides trichosuri PTRK_0001378700 I 0.811
scaffold61-EXSNAP2012.64 Pristionchus exspectatus scaffold61-EXSNAP2012.64 I 0.811
SMUV_0001002101 Syphacia muris SMUV_0001002101 I 0.811
SPAL_0001591300 Strongyloides papillosus SPAL_0001591300 I 0.811
SSTP_0001172300 Strongyloides stercoralis SSTP_0001172300 I 0.811
SVE_0996600 Strongyloides venezuelensis SVE_0996600 I 0.811
TCLT_0000386701 Thelazia callipaeda TCLT_0000386701 I 0.811
TELCIR_05516 Teladorsagia circumcincta TELCIR_05516 I 0.811
ANCCEY_01199 Ancylostoma ceylanicum ANCCEY_01199 I 0.790
DAPPUDRAFT_303110 Daphnia pulex DAPPUDRAFT_303110 I 0.788
L893_g16225 Steinernema glaseri L893_g16225 I 0.787
tetur34g00750 Tetranychus urticae tetur34g00750 I 0.777
L798_15710 Zootermopsis nevadensis L798_15710 I 0.774
WUBG_13334 Wuchereria bancrofti WUBG_13334 I 0.771
Bm3787 Brugia malayi Bm3787 I 0.771
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I 0.771
tetur17g03630 Tetranychus urticae tetur17g03630 I 0.771
EEL_0000817201 Elaeophora elaphi EEL_0000817201 I 0.771
L596_g25556 Steinernema carpocapsae L596_g25556 I 0.768
L893_g3995 Steinernema glaseri L893_g3995 I 0.767
RSKR_0001015700 Rhabditophanes kr3021 RSKR_0001015700 I 0.767
nr1i3 Xenopus tropicalis XB-GENE-479859 I 0.759
HHAL000201-PA Halyomorpha halys HHAL000201-PA I 0.756
PPAI005921 Phlebotomus papatasi PPAI005921 I 0.755
nAv.1.0.1.g10286 Acanthocheilonema viteae nAv.1.0.1.g10286 I 0.752
AFAF019254 Anopheles farauti AFAF019254 I 0.747