CBG13139 (Caenorhabditis briggsae)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 CBG13139 T311460_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
npax-1
M02427_2.00 		Caenorhabditis elegans
NBTGGAACRN
NYGTTCCAVN		 PBM
Weirauch et al.(2014)
pTH9054 		0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG13139 Paired box 58 170

Links

Other Paired box family TFs
Other Caenorhabditis briggsae TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG13881 Caenorhabditis briggsae CBG13881 N
CJA04915 Caenorhabditis japonica CJA04915 N
CRE20072 Caenorhabditis remanei CRE20072 N
HCOI00272000 Haemonchus contortus HCOI00272000 N
HCOI00467500 Haemonchus contortus HCOI00467500 N
TELCIR_06791 Teladorsagia circumcincta TELCIR_06791 N
TELCIR_17078 Teladorsagia circumcincta TELCIR_17078 N
ngn-1 Caenorhabditis elegans WBGene00003595 N