CBG13139 (Caenorhabditis briggsae)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 CBG13139 T311460_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
npax-1
M02427_2.00 		Caenorhabditis elegans
NBTGGAACRN
NYGTTCCAVN		 PBM
Weirauch et al.(2014)
pTH9054 		0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG13139 Paired box 58 170

Links

Other Paired box family TFs
Other Caenorhabditis briggsae TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
npax-1 Caenorhabditis elegans WBGene00017664 D 0.869
CRE26142 Caenorhabditis remanei CRE26142 I 0.847
CBN13224 Caenorhabditis brenneri CBN13224 I 0.805
CJA40106 Caenorhabditis japonica CJA40106 N 0.727