CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE26142
(
Caenorhabditis remanei
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
CRE26142
T311535_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
npax-1
M02427_2.00
Caenorhabditis elegans
NBTGGAACRN
NYGTTCCAVN
PBM
Weirauch et al.(2014)
pTH9054
0.793
0.793
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE26142
Paired box
3
114
SGEKVKAVGRSYNPGRPLCLEDRKKIVRLYEEGCRVSHIARLIGVTHSCVSKIMSRYRRTGSVQPRSFRATENQENDHSTWQKQQQKKEKPLAFSIERILSPEIKKEILPYQ
Links
Other
Paired box
family TFs
Other
Caenorhabditis remanei
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN13224
Caenorhabditis brenneri
CBN13224
I
0.910
npax-1
Caenorhabditis elegans
WBGene00017664
D
0.889
CBG13139
Caenorhabditis briggsae
CBG13139
I
0.847