DAPPUDRAFT_7942 (Daphnia pulex)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 DAPPUDRAFT_7942 T311554_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX7
M00346_2.00 		Homo sapiens
NGTYAYGSHN
NDSCRTRACN		 PBM
Barrera et al.(2016)
PAX7_REF 		0.744 0.744
PAX7
M00345_2.00 		Homo sapiens
NSGTCACGSN
NSCGTGACSN		 PBM
Barrera et al.(2016)
PAX7_P112L 		0.736 0.736
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX85447 Paired box 1 126

Links

Other Paired box family TFs
Other Daphnia pulex TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30198.m000869 Ricinus communis 30198.m000869 I
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I
Aquca_018_00039 Aquilegia coerulea Aquca_018_00039 I
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I
BHLH27 Arabidopsis thaliana AT4G29930 N
AT5G57150 Arabidopsis thaliana AT5G57150 N
BGIOSGA007229 Oryza indica BGIOSGA007229 I
BGIOSGA040642 Oryza indica BGIOSGA040642 N
Bo1g014720 Brassica oleracea Bo1g014720 N
Bo3g019430 Brassica oleracea Bo3g019430 N
Bo7g114110 Brassica oleracea Bo7g114110 N
Bo9g130890 Brassica oleracea Bo9g130890 N
Bostr.7867s0840 Boechera stricta Bostr.7867s0840 N
Bra002756 Brassica rapa Bra002756 N
Bra006831 Brassica rapa Bra006831 N
Bra011152 Brassica rapa Bra011152 N
Bra020462 Brassica rapa Bra020462 N
Bra024115 Brassica rapa Bra024115 N
BRADI3G01901 Brachypodium distachyon BRADI3G01901 I
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N
Cagra.0268s0010 Capsella grandiflora Cagra.0268s0010 N
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I
Cagra.1062s0003 Capsella grandiflora Cagra.1062s0003 I
Cagra.1569s0024 Capsella grandiflora Cagra.1569s0024 N
Carubv10006422m.g Capsella rubella Carubv10006422m.g N
Carubv10007380m.g Capsella rubella Carubv10007380m.g I
Carubv10009081m.g Capsella rubella Carubv10009081m.g I
cassava2997.m1 Manihot esculenta cassava2997.m1 I
Ciclev10009285m.g Citrus clementina Ciclev10009285m.g I
Cla010249 Citrullus lanatus Cla010249 N
Cla016068 Citrullus lanatus Cla016068 I
Cla019147 Citrullus lanatus Cla019147 N
Cla023112 Citrullus lanatus Cla023112 I
Cucsa.010660 Cucumis sativus Cucsa.010660 I
Cucsa.088960 Cucumis sativus Cucsa.088960 I
Cucsa.282100 Cucumis sativus Cucsa.282100 N
Cucsa.286080 Cucumis sativus Cucsa.286080 N
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I
Eucgr.C02208 Eucalyptus grandis Eucgr.C02208 I
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I
evm.TU.supercontig_115.71 Carica papaya evm.TU.supercontig_115.71 N
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I
fgenesh2_kg.7__1196__AT4G29930.1 Arabidopsis lyrata fgenesh2_kg.7__1196__AT4G29930.1 N
fgenesh2_kg.8__1627__AT5G57150.1 Arabidopsis lyrata fgenesh2_kg.8__1627__AT5G57150.1 N
gene17273-v1.0-hybrid Fragaria vesca gene17273-v1.0-hybrid I
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I
GLYMA05G38530 Glycine max GLYMA05G38530 I
GLYMA09G06770 Glycine max GLYMA09G06770 I
GLYMA13G00480 Glycine max GLYMA13G00480 I
GLYMA15G18070 Glycine max GLYMA15G18070 I
GLYMA16G26291 Glycine max GLYMA16G26291 I
GLYMA17G06610 Glycine max GLYMA17G06610 I
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I
Gorai.013G242800 Gossypium raimondii Gorai.013G242800 I
GRMZM2G042893 Zea mays GRMZM2G042893 N
GRMZM2G042895 Zea mays GRMZM2G042895 N
GRMZM2G119823 Zea mays GRMZM2G119823 I
GRMZM2G139372 Zea mays GRMZM2G139372 N
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I
gw1.257.54.1 Physcomitrella patens gw1.257.54.1 I
LPERR04G04520 Leersia perrieri LPERR04G04520 N
Lus10006951.g Linum usitatissimum Lus10006951.g I
Lus10030609.g Linum usitatissimum Lus10030609.g N
Lus10030880.g Linum usitatissimum Lus10030880.g N
MDP0000133262 Malus domestica MDP0000133262 I
MDP0000219146 Malus domestica MDP0000219146 I
MDP0000243628 Malus domestica MDP0000243628 I
MDP0000318229 Malus domestica MDP0000318229 I
mgf019723m Mimulus guttatus mgf019723m I
mgf024029m Mimulus guttatus mgf024029m I
MLOC_52192 Hordeum vulgare MLOC_52192 I
MLOC_62844 Hordeum vulgare MLOC_62844 N
MTR_2g038040 Medicago truncatula MTR_2g038040 I
OBART02G01550 Oryza barthii OBART02G01550 I
OGLUM02G01420 Oryza glumaepatula OGLUM02G01420 I
OMERI02G00890 Oryza meridionalis OMERI02G00890 I
OMERI03G04020 Oryza meridionalis OMERI03G04020 N
ONIVA01G07170 Oryza nivara ONIVA01G07170 N
ONIVA02G01430 Oryza nivara ONIVA02G01430 I
OPUNC02G01010 Oryza punctata OPUNC02G01010 I
OPUNC04G05630 Oryza punctata OPUNC04G05630 N
orange1.1g025665m.g Citrus sinensis orange1.1g025665m.g I
ORGLA02G0014200 Oryza glaberrima ORGLA02G0014200 I
ORUFI02G01530 Oryza rufipogon ORUFI02G01530 I
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N
TDR Oryza sativa OS02G0120500 I
OS04G0301500 Oryza sativa OS04G0301500 N
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I
Pavir.Ga02255 Panicum virgatum Pavir.Ga02255 N
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I
PGSC0003DMG400004087 Solanum tuberosum PGSC0003DMG400004087 I
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I
Pm020879 Prunus mume Pm020879 I
AMS Populus trichocarpa POPTR_0009s13860 I
POPTR_0018s13850 Populus trichocarpa POPTR_0018s13850 I
POPTR_0018s13860 Populus trichocarpa POPTR_0018s13860 I
PRUPE_ppa021593mg Prunus persica PRUPE_ppa021593mg N
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I
SapurV1A.0140s0210 Salix purpurea SapurV1A.0140s0210 I
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I
Sb04g001650 Sorghum bicolor Sb04g001650 I
Sb07g004190 Sorghum bicolor Sb07g004190 N
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I
Si006199m.g Setaria italica Si006199m.g I
Si006500m.g Setaria italica Si006500m.g I
Si010413m.g Setaria italica Si010413m.g N
Si010812m.g Setaria italica Si010812m.g N
Si019518m.g Setaria italica Si019518m.g I
Solyc07g018010.2 Solanum lycopersicum Solyc07g018010.2 I
TCM_039471 Theobroma cacao TCM_039471 I
Thhalv10014506m.g Eutrema salsugineum Thhalv10014506m.g N
Thhalv10027332m.g Eutrema salsugineum Thhalv10027332m.g N
Traes_2AL_411B944D6 Triticum aestivum Traes_2AL_411B944D6 N
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N
Traes_6AS_4C2F64614 Triticum aestivum Traes_6AS_4C2F64614 I
Traes_6AS_66A98BA55 Triticum aestivum Traes_6AS_66A98BA55 I
VIT_11s0052g00100 Vitis vinifera VIT_11s0052g00100 I