CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra024115
(
Brassica rapa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Bra024115
T031486_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra024115.1-P
bHLH
52
99
SSKNVVSERNRRQKLNQRLFALRSVVPNITKLDKASIVKDSIDYMQKL
Links
Other
bHLH
family TFs
Other
Brassica rapa
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BHLH27
Arabidopsis thaliana
AT4G29930
N
0.914
Bo7g114110
Brassica oleracea
Bo7g114110
N
0.914
Bostr.7867s0840
Boechera stricta
Bostr.7867s0840
N
0.914
Cagra.0268s0010
Capsella grandiflora
Cagra.0268s0010
N
0.914
Carubv10006422m.g
Capsella rubella
Carubv10006422m.g
N
0.914
Thhalv10027332m.g
Eutrema salsugineum
Thhalv10027332m.g
N
0.914
fgenesh2_kg.7__1196__AT4G29930.1
Arabidopsis lyrata
fgenesh2_kg.7__1196__AT4G29930.1
N
0.911
Bo1g014720
Brassica oleracea
Bo1g014720
N
0.890
Bra011152
Brassica rapa
Bra011152
N
0.890
AT5G57150
Arabidopsis thaliana
AT5G57150
N
0.877
Bo3g019430
Brassica oleracea
Bo3g019430
N
0.877
Bo9g130890
Brassica oleracea
Bo9g130890
N
0.877
Bra002756
Brassica rapa
Bra002756
N
0.877
Bra006831
Brassica rapa
Bra006831
N
0.877
Bra020462
Brassica rapa
Bra020462
N
0.877
fgenesh2_kg.8__1627__AT5G57150.1
Arabidopsis lyrata
fgenesh2_kg.8__1627__AT5G57150.1
N
0.877
Bostr.26833s0543
Boechera stricta
Bostr.26833s0543
N
0.877
Cagra.1569s0024
Capsella grandiflora
Cagra.1569s0024
N
0.877
Thhalv10014506m.g
Eutrema salsugineum
Thhalv10014506m.g
N
0.877
mgf024029m
Mimulus guttatus
mgf024029m
I
0.853
Gorai.009G002200
Gossypium raimondii
Gorai.009G002200
I
0.853
AMS
Populus trichocarpa
POPTR_0009s13860
I
0.846
PRUPE_ppa022211mg
Prunus persica
PRUPE_ppa022211mg
I
0.846
Pm020879
Prunus mume
Pm020879
I
0.846
mgf018455m
Mimulus guttatus
mgf018455m
I
0.846
gene23716-v1.0-hybrid
Fragaria vesca
gene23716-v1.0-hybrid
I
0.846
SapurV1A.0218s0460
Salix purpurea
SapurV1A.0218s0460
I
0.846
GSMUA_Achr6G30900_001
Musa acuminata
GSMUA_Achr6G30900_001
N
0.843
Lus10030880.g
Linum usitatissimum
Lus10030880.g
N
0.841
MDP0000243628
Malus domestica
MDP0000243628
I
0.841