Ppa-mbr-1 (Pristionchus pacificus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 PPA15862 T314048_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mbr-1
M00707_2.00 		Caenorhabditis elegans
NRNGGGCCDN
NHGGCCCNYN		 PBM
Narasimhan et al.(2015)
pTH10031 		0.810 0.810
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA15862 Pipsqueak 136 178

Links

Other Pipsqueak family TFs
Other Pristionchus pacificus TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_08011 Schistosoma haematobium A_08011 N
D915_06786 Fasciola hepatica D915_06786 N
SCUD_0000264601 Schistosoma curassoni SCUD_0000264601 N
Smp_134870 Schistosoma mansoni Smp_134870 N
SMRZ_0000176601 Schistosoma margrebowiei SMRZ_0000176601 N
SMTD_0000035801 Schistosoma mattheei SMTD_0000035801 N
SROB_0000218201 Schistosoma rodhaini SROB_0000218201 N
TRE_0001399901 Trichobilharzia regenti TRE_0001399901 N