SINV11439 (Solenopsis invicta)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 SINV11439 T314144_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SINV11439-PA Pipsqueak 300 343
SINV11439-PA Pipsqueak 354 395
SINV11439-PA Pipsqueak 409 454
SINV11439-PA Pipsqueak 461 504

Links

Other Pipsqueak family TFs
Other Solenopsis invicta TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28650.m000191 Ricinus communis 28650.m000191 N 0.000
SCL14 Arabidopsis thaliana AT1G07530 N 0.000
SCL33 Arabidopsis thaliana AT2G29060 N 0.000
Bo4g065860 Brassica oleracea Bo4g065860 N 0.000
Bo4g168030 Brassica oleracea Bo4g168030 N 0.000
Bostr.25219s0207 Boechera stricta Bostr.25219s0207 N 0.000
Bostr.27991s0167 Boechera stricta Bostr.27991s0167 N 0.000
Bra028390 Brassica rapa Bra028390 N 0.000
Bra030688 Brassica rapa Bra030688 N 0.000
Bra035653 Brassica rapa Bra035653 N 0.000
Cagra.1671s0373 Capsella grandiflora Cagra.1671s0373 N 0.000
Cagra.3264s0006 Capsella grandiflora Cagra.3264s0006 N 0.000
Carubv10008391m.g Capsella rubella Carubv10008391m.g N 0.000
Carubv10024938m.g Capsella rubella Carubv10024938m.g N 0.000
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.000
Ca_16678 Cicer arietinum Ca_16678 N 0.000
evm.TU.supercontig_81.124 Carica papaya evm.TU.supercontig_81.124 N 0.000
evm.TU.supercontig_81.126 Carica papaya evm.TU.supercontig_81.126 N 0.000
GLYMA11G14750 Glycine max GLYMA11G14750 N 0.000
GLYMA12G06670 Glycine max GLYMA12G06670 N 0.000
Lus10016521.g Linum usitatissimum Lus10016521.g N 0.000
MTR_4g064160 Medicago truncatula MTR_4g064160 N 0.000
Pm000719 Prunus mume Pm000719 N 0.000
POPTR_0001s24850 Populus trichocarpa POPTR_0001s24850 N 0.000
POPTR_0009s03790 Populus trichocarpa POPTR_0009s03790 N 0.000
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N 0.000
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.000
SapurV1A.0041s0160 Salix purpurea SapurV1A.0041s0160 N 0.000
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.000
TCM_041815 Theobroma cacao TCM_041815 N 0.000
Thhalv10006868m.g Eutrema salsugineum Thhalv10006868m.g N 0.000
Thhalv10016312m.g Eutrema salsugineum Thhalv10016312m.g N 0.000