maker-nMf.1.1.scaf00051-snap-gene-0.15 (Meloidogyne floridensis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 maker-nMf.1.1.scaf00051-snap-gene-0.15 T315068_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf00051-snap-gene-0.15-mRNA-1 Pipsqueak 406 435
maker-nMf.1.1.scaf00051-snap-gene-0.15-mRNA-1 Pipsqueak 595 638

Links

Other Pipsqueak family TFs
Other Meloidogyne floridensis TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASU_08146 Ascaris suum ASU_08146 N 0.808
Bm5461 Brugia malayi Bm5461 N 0.795
BXY_1526500 Bursaphelenchus xylophilus BXY_1526500 N 0.781
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.795
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.812
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.795
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.795
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.795
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.795