ASU_08146 (Ascaris suum)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 ASU_08146 T315004_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ASU_08146 Pipsqueak 384 426
ASU_08146 Pipsqueak 571 614

Links

Other Pipsqueak family TFs
Other Ascaris suum TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.930
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.920
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.919
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.919
Bm5461 Brugia malayi Bm5461 N 0.919
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.919
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.919
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.918
LOAG_18975 Loa loa LOAG_18975 N 0.917
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.906
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.906
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 0.906
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.895
EVEC_0000343001 Enterobius vermicularis EVEC_0000343001 N 0.884
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.882
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.882
OFLC_0001352601 Onchocerca flexuosa OFLC_0001352601 N 0.877
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.874
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.871
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.859
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.859
SMUV_0000352701 Syphacia muris SMUV_0000352701 N 0.851
D917_10060 Trichinella nativa D917_10060 N 0.843
EFV59144 Trichinella spiralis EFV59144 N 0.843
CBN10229 Caenorhabditis brenneri CBN10229 N 0.835
TTRE_0000470901 Trichuris trichiura TTRE_0000470901 N 0.833
D918_09847 Trichuris suis D918_09847 N 0.833
L893_g31084 Steinernema glaseri L893_g31084 N 0.831
BXY_1526500 Bursaphelenchus xylophilus BXY_1526500 N 0.829
CJA11562 Caenorhabditis japonica CJA11562 N 0.828
TMUE_s0104004300 Trichuris muris TMUE_s0104004300 N 0.821
CRE07418 Caenorhabditis remanei CRE07418 N 0.816
maker-nMf.1.1.scaf00051-snap-gene-0.15 Meloidogyne floridensis maker-nMf.1.1.scaf00051-snap-gene-0.15 N 0.808
L892_g27509 Steinernema scapterisci L892_g27509 N 0.805
CBG04528 Caenorhabditis briggsae CBG04528 N 0.805
L889_g3580 Steinernema feltiae L889_g3580 N 0.800
L596_g5367 Steinernema carpocapsae L596_g5367 N 0.800
L898_g31322 Steinernema monticolum L898_g31322 N 0.795
RSKR_0000834400 Rhabditophanes kr3021 RSKR_0000834400 N 0.788