scaffold10-EXSNAP2012.60 (Pristionchus exspectatus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 scaffold10-EXSNAP2012.60 T315118_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold10-EXSNAP2012.60 Pipsqueak 138 180
scaffold10-EXSNAP2012.60 Pipsqueak 413 457

Links

Other Pipsqueak family TFs
Other Pristionchus exspectatus TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASU_08146 Ascaris suum ASU_08146 N 0.895
Bm5461 Brugia malayi Bm5461 N 0.884
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.884
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.884
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.884
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.884
LOAG_18975 Loa loa LOAG_18975 N 0.881
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 0.872
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.872
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.872
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.872
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.872
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.862
EVEC_0000343001 Enterobius vermicularis EVEC_0000343001 N 0.860
OFLC_0001352601 Onchocerca flexuosa OFLC_0001352601 N 0.849
SMUV_0000352701 Syphacia muris SMUV_0000352701 N 0.839
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.835
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.835
L893_g31084 Steinernema glaseri L893_g31084 N 0.831
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.828
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.824
CJA11562 Caenorhabditis japonica CJA11562 N 0.816
CBN10229 Caenorhabditis brenneri CBN10229 N 0.814
L889_g3580 Steinernema feltiae L889_g3580 N 0.814
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.814
L596_g5367 Steinernema carpocapsae L596_g5367 N 0.812
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.812
CRE07418 Caenorhabditis remanei CRE07418 N 0.805
L892_g27509 Steinernema scapterisci L892_g27509 N 0.805
EFV59144 Trichinella spiralis EFV59144 N 0.795
D917_10060 Trichinella nativa D917_10060 N 0.795
L898_g31322 Steinernema monticolum L898_g31322 N 0.795
CBG04528 Caenorhabditis briggsae CBG04528 N 0.793
SBAD_0001053101 Soboliphyme baturini SBAD_0001053101 N 0.789
D918_09847 Trichuris suis D918_09847 N 0.786
TTRE_0000470901 Trichuris trichiura TTRE_0000470901 N 0.786