CBN10229 (Caenorhabditis brenneri)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 CBN10229 T313324_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CBN10229 Pipsqueak 155 197
CBN10229 Pipsqueak 346 391

Links

Other Pipsqueak family TFs
Other Caenorhabditis brenneri TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE07418 Caenorhabditis remanei CRE07418 N 0.977
CJA11562 Caenorhabditis japonica CJA11562 N 0.954
CBG04528 Caenorhabditis briggsae CBG04528 N 0.943
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 0.869
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.849
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.849
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.837
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.837
ASU_08146 Ascaris suum ASU_08146 N 0.835
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.835
LOAG_18975 Loa loa LOAG_18975 N 0.833
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.828
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.828
Bm5461 Brugia malayi Bm5461 N 0.826
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.826
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.826
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.826
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.826
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.824
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.824
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.814
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.800
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.800
EFV59144 Trichinella spiralis EFV59144 N 0.795
D917_10060 Trichinella nativa D917_10060 N 0.795
L893_g31084 Steinernema glaseri L893_g31084 N 0.795
L596_g5367 Steinernema carpocapsae L596_g5367 N 0.788
L889_g3580 Steinernema feltiae L889_g3580 N 0.788
D918_09847 Trichuris suis D918_09847 N 0.786
TTRE_0000470901 Trichuris trichiura TTRE_0000470901 N 0.786
OFLC_0001352601 Onchocerca flexuosa OFLC_0001352601 N 0.781