CBG04528 (Caenorhabditis briggsae)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 CBG04528 T313320_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CBG04528 Pipsqueak 155 197
CBG04528 Pipsqueak 344 389

Links

Other Pipsqueak family TFs
Other Caenorhabditis briggsae TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE07418 Caenorhabditis remanei CRE07418 N 0.966
CJA11562 Caenorhabditis japonica CJA11562 N 0.954
CBN10229 Caenorhabditis brenneri CBN10229 N 0.943
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 0.839
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.839
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.839
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.835
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.826
LOAG_18975 Loa loa LOAG_18975 N 0.821
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.816
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.816
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.816
Bm5461 Brugia malayi Bm5461 N 0.814
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.814
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.814
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.814
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.814
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.812
ASU_08146 Ascaris suum ASU_08146 N 0.805
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.805
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.793
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.788
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.788
EFV59144 Trichinella spiralis EFV59144 N 0.783
D917_10060 Trichinella nativa D917_10060 N 0.783
L893_g31084 Steinernema glaseri L893_g31084 N 0.783