HCOI01126400 (Haemonchus contortus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 HCOI01126400 T315047_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI01126400.t1 Pipsqueak 221 263
HCOI01126400.t1 Pipsqueak 380 424

Links

Other Pipsqueak family TFs
Other Haemonchus contortus TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 1.000
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 1.000
ASU_08146 Ascaris suum ASU_08146 N 0.906
Bm5461 Brugia malayi Bm5461 N 0.872
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.872
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.872
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.872
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.872
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.872
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.872
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.871
LOAG_18975 Loa loa LOAG_18975 N 0.869
CJA11562 Caenorhabditis japonica CJA11562 N 0.862
CRE07418 Caenorhabditis remanei CRE07418 N 0.851
CBN10229 Caenorhabditis brenneri CBN10229 N 0.849
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.847
L893_g31084 Steinernema glaseri L893_g31084 N 0.843
CBG04528 Caenorhabditis briggsae CBG04528 N 0.839
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.839
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.837
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.828
EVEC_0000343001 Enterobius vermicularis EVEC_0000343001 N 0.826
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.824
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.824
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.824
OFLC_0001352601 Onchocerca flexuosa OFLC_0001352601 N 0.822
D918_09847 Trichuris suis D918_09847 N 0.821
TTRE_0000470901 Trichuris trichiura TTRE_0000470901 N 0.821
EFV59144 Trichinella spiralis EFV59144 N 0.819
D917_10060 Trichinella nativa D917_10060 N 0.819
L596_g5367 Steinernema carpocapsae L596_g5367 N 0.812
TMUE_s0104004300 Trichuris muris TMUE_s0104004300 N 0.810
SMUV_0000352701 Syphacia muris SMUV_0000352701 N 0.805
L889_g3580 Steinernema feltiae L889_g3580 N 0.802
L892_g27509 Steinernema scapterisci L892_g27509 N 0.793
L898_g31322 Steinernema monticolum L898_g31322 N 0.784