D917_10060 (Trichinella nativa)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 D917_10060 T315019_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
D917_10060 Pipsqueak 269 309
D917_10060 Pipsqueak 526 569

Links

Other Pipsqueak family TFs
Other Trichinella nativa TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EFV59144 Trichinella spiralis EFV59144 N 1.000
TTRE_0000470901 Trichuris trichiura TTRE_0000470901 N 0.976
D918_09847 Trichuris suis D918_09847 N 0.976
TMUE_s0104004300 Trichuris muris TMUE_s0104004300 N 0.952
SBAD_0001053101 Soboliphyme baturini SBAD_0001053101 N 0.844
ASU_08146 Ascaris suum ASU_08146 N 0.843
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.831
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.819
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.819
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 0.819
L892_g27509 Steinernema scapterisci L892_g27509 N 0.807
L893_g31084 Steinernema glaseri L893_g31084 N 0.807
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.805
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.800
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.800
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.795
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.795
CBN10229 Caenorhabditis brenneri CBN10229 N 0.795
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.795
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.795
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.795
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.795
L596_g5367 Steinernema carpocapsae L596_g5367 N 0.795
Bm5461 Brugia malayi Bm5461 N 0.795
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.791
LOAG_18975 Loa loa LOAG_18975 N 0.786
L889_g3580 Steinernema feltiae L889_g3580 N 0.783
CBG04528 Caenorhabditis briggsae CBG04528 N 0.783
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.782