CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SBAD_0001053101
(
Soboliphyme baturini
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
SBAD_0001053101
T315117_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SBAD_0001053101-mRNA-1
Pipsqueak
17
62
SKADLEAAVLDIRSGKLGTRRASVIYGVPRSTLRNKIYKLEASNNR
SBAD_0001053101-mRNA-1
Pipsqueak
235
280
DKSALAQAVQSVRRGEMSVHRAGSYYGVPHSTLEYKVKERNLIKSR
Links
Other
Pipsqueak
family TFs
Other
Soboliphyme baturini
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EFV59144
Trichinella spiralis
EFV59144
N
0.844
D917_10060
Trichinella nativa
D917_10060
N
0.844
D918_09847
Trichuris suis
D918_09847
N
0.822
TTRE_0000470901
Trichuris trichiura
TTRE_0000470901
N
0.822
TMUE_s0104004300
Trichuris muris
TMUE_s0104004300
N
0.811
scaffold10-EXSNAP2012.60
Pristionchus exspectatus
scaffold10-EXSNAP2012.60
N
0.789