CJA11562 (Caenorhabditis japonica)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 CJA11562 T313421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CJA11562a Pipsqueak 270 312
CJA11562a Pipsqueak 461 506
CJA11562b Pipsqueak 152 194
CJA11562b Pipsqueak 343 388

Links

Other Pipsqueak family TFs
Other Caenorhabditis japonica TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE07418 Caenorhabditis remanei CRE07418 N 0.977
CBG04528 Caenorhabditis briggsae CBG04528 N 0.954
CBN10229 Caenorhabditis brenneri CBN10229 N 0.954
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 0.862
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.862
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.862
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.849
LOAG_18975 Loa loa LOAG_18975 N 0.845
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.839
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.839
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.839
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.835
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.835
Bm5461 Brugia malayi Bm5461 N 0.828
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.828
ASU_08146 Ascaris suum ASU_08146 N 0.828
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.828
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.828
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.828
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.828
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.816
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.812
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.812
L893_g31084 Steinernema glaseri L893_g31084 N 0.807
OFLC_0001352601 Onchocerca flexuosa OFLC_0001352601 N 0.795
RSKR_0000834400 Rhabditophanes kr3021 RSKR_0000834400 N 0.793
L596_g5367 Steinernema carpocapsae L596_g5367 N 0.782
L889_g3580 Steinernema feltiae L889_g3580 N 0.782
L892_g27509 Steinernema scapterisci L892_g27509 N 0.782
EVEC_0000343001 Enterobius vermicularis EVEC_0000343001 N 0.779