AT2G01818 (Arabidopsis thaliana)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 AT2G01818 T315207_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G01818
M07247_2.00		 Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT2G01818_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G01818.1 PLATZ 69 146
AT2G01818.2 PLATZ 5 82

Links

Other PLATZ family TFs
Other Arabidopsis thaliana TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29968.m000644 Ricinus communis 29968.m000644 I 0.731
Bo2g134600 Brassica oleracea Bo2g134600 I 0.885
Bo7g078820 Brassica oleracea Bo7g078820 I 0.910
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I 0.910
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I 0.910
Carubv10017978m.g Capsella rubella Carubv10017978m.g I 0.910
cassava20325.m1 Manihot esculenta cassava20325.m1 I 0.718
Eucgr.G02080 Eucalyptus grandis Eucgr.G02080 I 0.718
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I 0.705
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I 0.910
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I 0.731
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I 0.705
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I 0.718
Lus10013242.g Linum usitatissimum Lus10013242.g I 0.744
Lus10030763.g Linum usitatissimum Lus10030763.g I 0.718
MDP0000290118 Malus domestica MDP0000290118 I 0.718
PK02661.1 Cannabis sativa PK02661.1 I 0.705
Pm005894 Prunus mume Pm005894 I 0.731
POPTR_0008s13660 Populus trichocarpa POPTR_0008s13660 I 0.756
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I 0.756
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I 0.731
SapurV1A.0015s0650 Salix purpurea SapurV1A.0015s0650 I 0.764
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I 0.731
TCM_011266 Theobroma cacao TCM_011266 I 0.718
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I 0.949