CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10019494m.g
(
Capsella rubella
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Carubv10019494m.g
T315991_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10019494m
PLATZ
61
132
RRYVYRDVLRVEDGSKLMDCSLIQPYITNSSKVVFINERPQSRQFRGSGNICITCDRSLQSPYIFCSLSCKI
Links
Other
PLATZ
family TFs
Other
Capsella rubella
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008836
Ricinus communis
30174.m008836
N
0.736
AT3G60670
Arabidopsis thaliana
AT3G60670
N
0.958
Bo4g104880
Brassica oleracea
Bo4g104880
N
0.931
Bo8g095360
Brassica oleracea
Bo8g095360
N
0.889
Bostr.13158s0066
Boechera stricta
Bostr.13158s0066
N
1.000
Bra007550
Brassica rapa
Bra007550
N
0.889
Bra014478
Brassica rapa
Bra014478
N
0.931
Cagra.6011s0013
Capsella grandiflora
Cagra.6011s0013
N
0.986
cassava14439.m1
Manihot esculenta
cassava14439.m1
N
0.722
Eucgr.E00457
Eucalyptus grandis
Eucgr.E00457
N
0.722
evm.TU.supercontig_145.1
Carica papaya
evm.TU.supercontig_145.1
N
0.750
fgenesh2_kg.5__2532__AT3G60670.1
Arabidopsis lyrata
fgenesh2_kg.5__2532__AT3G60670.1
N
0.986
GLYMA01G17580
Glycine max
GLYMA01G17580
N
0.708
GLYMA11G17770
Glycine max
GLYMA11G17770
N
0.708
Gorai.001G174900
Gossypium raimondii
Gorai.001G174900
N
0.722
Gorai.004G163500
Gossypium raimondii
Gorai.004G163500
N
0.722
Gorai.007G089600
Gossypium raimondii
Gorai.007G089600
N
0.750
PDK_20s1397531g003
Phoenix dactylifera
PDK_20s1397531g003
N
0.722
PK01122.1
Cannabis sativa
PK01122.1
N
0.722
Pm017841
Prunus mume
Pm017841
N
0.708
PRUPE_ppa023785mg
Prunus persica
PRUPE_ppa023785mg
N
0.708
TCM_005554
Theobroma cacao
TCM_005554
N
0.764
TCM_016018
Theobroma cacao
TCM_016018
N
0.722
Thhalv10006374m.g
Eutrema salsugineum
Thhalv10006374m.g
N
0.917
VIT_02s0154g00150
Vitis vinifera
VIT_02s0154g00150
N
0.722
VIT_15s0048g00580
Vitis vinifera
VIT_15s0048g00580
N
0.750