Carubv10019494m.g (Capsella rubella)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Carubv10019494m.g T315991_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019494m PLATZ 61 132

Links

Other PLATZ family TFs
Other Capsella rubella TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.13158s0066 Boechera stricta Bostr.13158s0066 N 1.000
fgenesh2_kg.5__2532__AT3G60670.1 Arabidopsis lyrata fgenesh2_kg.5__2532__AT3G60670.1 N 0.986
Cagra.6011s0013 Capsella grandiflora Cagra.6011s0013 N 0.986
AT3G60670 Arabidopsis thaliana AT3G60670 N 0.958
Bo4g104880 Brassica oleracea Bo4g104880 N 0.931
Bra014478 Brassica rapa Bra014478 N 0.931
Thhalv10006374m.g Eutrema salsugineum Thhalv10006374m.g N 0.917
Bo8g095360 Brassica oleracea Bo8g095360 N 0.889
Bra007550 Brassica rapa Bra007550 N 0.889
TCM_005554 Theobroma cacao TCM_005554 N 0.764
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.750
evm.TU.supercontig_145.1 Carica papaya evm.TU.supercontig_145.1 N 0.750
Gorai.007G089600 Gossypium raimondii Gorai.007G089600 N 0.750
30174.m008836 Ricinus communis 30174.m008836 N 0.736
TCM_016018 Theobroma cacao TCM_016018 N 0.722
VIT_02s0154g00150 Vitis vinifera VIT_02s0154g00150 N 0.722
cassava14439.m1 Manihot esculenta cassava14439.m1 N 0.722
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.722
Gorai.001G174900 Gossypium raimondii Gorai.001G174900 N 0.722
Gorai.004G163500 Gossypium raimondii Gorai.004G163500 N 0.722
PK01122.1 Cannabis sativa PK01122.1 N 0.722
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.722
GLYMA01G17580 Glycine max GLYMA01G17580 N 0.708
GLYMA11G17770 Glycine max GLYMA11G17770 N 0.708
PRUPE_ppa023785mg Prunus persica PRUPE_ppa023785mg N 0.708
Pm017841 Prunus mume Pm017841 N 0.708