CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo8g095360
(
Brassica oleracea
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04640 (PLATZ)
IPR006734
Bo8g095360
T315259_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo8g095360.1
PLATZ
69
140
RRYMYNDVLRVEDGSKLMDCSLIQPYIVNSSKVVFINERPHPRQFRGSGNFCSTCDRSLQSPYLFCSLSCKI
Links
Other
PLATZ
family TFs
Other
Brassica oleracea
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra007550
Brassica rapa
Bra007550
N
0.958
Bo4g104880
Brassica oleracea
Bo4g104880
N
0.931
Bra014478
Brassica rapa
Bra014478
N
0.931
Thhalv10006374m.g
Eutrema salsugineum
Thhalv10006374m.g
N
0.917
fgenesh2_kg.5__2532__AT3G60670.1
Arabidopsis lyrata
fgenesh2_kg.5__2532__AT3G60670.1
N
0.903
Bostr.13158s0066
Boechera stricta
Bostr.13158s0066
N
0.889
Cagra.6011s0013
Capsella grandiflora
Cagra.6011s0013
N
0.889
Carubv10019494m.g
Capsella rubella
Carubv10019494m.g
N
0.889
AT3G60670
Arabidopsis thaliana
AT3G60670
N
0.875
TCM_005554
Theobroma cacao
TCM_005554
N
0.764
Gorai.007G089600
Gossypium raimondii
Gorai.007G089600
N
0.736
evm.TU.supercontig_145.1
Carica papaya
evm.TU.supercontig_145.1
N
0.722
Gorai.001G174900
Gossypium raimondii
Gorai.001G174900
N
0.722
VIT_15s0048g00580
Vitis vinifera
VIT_15s0048g00580
N
0.708
Gorai.004G163500
Gossypium raimondii
Gorai.004G163500
N
0.708