NFKB2 (Gallus gallus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSGALG00000005653 T317189_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfkb2
M09356_2.00 		Mus musculus
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C 		0.811 0.811
NFKB2
M03446_2.00 		Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN		 SELEX
Jolma et al.(2013)
NFKB2_1 		0.799 0.799
NFKB2
M05699_2.00 		Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX 		0.799 0.799
NFKB2
M09344_2.00 		Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B 		0.799 0.799
NFKB2
M05700_2.00 		Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX 		0.799 0.799
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000009054 Rel 32 212
ENSGALP00000042025 Rel 32 212

Links

Other Rel family TFs
Other Gallus gallus TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
15460_YLR375W Saccharomyces paradoxus 15460_YLR375W I
15823_YLR375W Saccharomyces mikatae 15823_YLR375W I
16393_YLR375W Saccharomyces bayanus 16393_YLR375W I
3056_YDL048C Saccharomyces mikatae 3056_YDL048C I
3579_YDL048C Saccharomyces paradoxus 3579_YDL048C I
3742_YDL048C Saccharomyces bayanus 3742_YDL048C I
KAFR_0A06120 Kazachstania africana KAFR_0A06120 I
KLTH0D13618g Lachancea thermotolerans KLTH0D13618g I
KLTH0D13618g Kluyveromyces thermotolerans KLTH0D13618g I
NCAS_0A02360 Naumovozyma castellii NCAS_0A02360 I
NCAS_0J01300 Naumovozyma castellii NCAS_0J01300 I
NDAI_0D04510 Naumovozyma dairenensis NDAI_0D04510 I
Scas_Contig670.2 Saccharomyces castellii Scas_Contig670.2 I
Scas_Contig683.30 Saccharomyces castellii Scas_Contig683.30 I
SKUD_202710 Saccharomyces kudriavzevii SKUD_202710 I
SU7_0544 Saccharomyces arboricola SU7_0544 I
SU7_2363 Saccharomyces arboricola SU7_2363 I
TBLA_0I02770 Tetrapisispora blattae TBLA_0I02770 I
STP4 Saccharomyces cerevisiae YDL048C D
STP3 Saccharomyces cerevisiae YLR375W D
ZBAI_02561 Zygosaccharomyces bailii ZBAI_02561 I
ZBAI_06958 Zygosaccharomyces bailii ZBAI_06958 I
ZYRO0B07436g Zygosaccharomyces rouxii ZYRO0B07436g I