CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PPAI010985
(
Phlebotomus papatasi
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
PPAI010985
T319783_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.732
0.732
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN
NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.732
0.732
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.732
0.732
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH
DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.732
0.732
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM
KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.732
0.732
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.732
0.732
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN
NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.732
0.732
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN
NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.732
0.732
RUNX3
M11252_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.732
0.732
RUNX3
M11253_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.732
0.732
RUNX3
M11254_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.732
0.732
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.732
0.732
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN
NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.722
0.722
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV
BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.722
0.722
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.722
0.722
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV
BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.722
0.722
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.722
0.722
Runx1
M09633_2.00
Mus musculus
NWAACCACAR
YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.722
0.722
RUNX1
M11258_2.00
Homo sapiens
ACCRCA
TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.722
0.722
RUNX1
M11259_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.722
0.722
RUNX1
M11260_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.722
0.722
RUNX1
M11261_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.722
0.722
RUNX1
M11262_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.722
0.722
RUNX1
M11263_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.722
0.722
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN
NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.701
0.701
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.701
0.701
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.701
0.701
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR
YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.701
0.701
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.701
0.701
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.701
0.701
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.701
0.701
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.701
0.701
RUNX2
M11255_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.701
0.701
RUNX2
M11256_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.701
0.701
RUNX2
M11257_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.701
0.701
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.701
0.701
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPAI010985-PA
Runt
65
161
LGDFLSEHPGELIRTGSPLFVCTVLPPHWRSNKTLPVAFKVVALGDIGDGTMVTVRAGNDENYCAELRNSTAVMKNQVAKFNDLRFVGRSGRVHFKS
Links
Other
Runt
family TFs
Other
Phlebotomus papatasi
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL007036
Aedes aegypti
AAEL007036
I
0.743
AALB007753
Anopheles albimanus
AALB007753
I
0.957
AARA011332
Anopheles arabiensis
AARA011332
I
0.928
ACEP16391
Atta cephalotes
ACEP16391
I
0.804
ACEP16397
Atta cephalotes
ACEP16397
I
0.796
ACEP16409
Atta cephalotes
ACEP16409
I
0.778
ACHR007816
Anopheles christyi
ACHR007816
I
0.918
ACUA002933
Anopheles culicifacies
ACUA002933
I
0.901
ACYPI007541
Acyrthosiphon pisum
ACYPI007541
I
0.814
ADIR001029
Anopheles dirus
ADIR001029
I
0.919
AEPI011470
Anopheles epiroticus
AEPI011470
I
0.978
AFAF001885
Anopheles farauti
AFAF001885
N
0.707
AFAF002111
Anopheles farauti
AFAF002111
I
0.918
AFUN005474
Anopheles funestus
AFUN005474
I
0.739
AFUN010424
Anopheles funestus
AFUN010424
I
0.909
AMEC011614
Anopheles melas
AMEC011614
I
0.865
AMEM009849
Anopheles merus
AMEM009849
N
0.841
AMIN005760
Anopheles minimus
AMIN005760
I
0.883
AQUA008686
Anopheles quadriannulatus
AQUA008686
I
0.947
ASIS002518
Anopheles sinensis
ASIS002518
I
0.957
BGIBMGA008970
Bombyx mori
BGIBMGA008970
I
0.871
Cflo_03909--XP_394016.2_APIME
Camponotus floridanus
Cflo_03909--XP_394016.2_APIME
I
0.794
CLEC011123
Cimex lectularius
CLEC011123
I
0.832
CLEC011127
Cimex lectularius
CLEC011127
I
0.804
CPIJ006369
Culex quinquefasciatus
CPIJ006369
I
0.789
CPIJ006372
Culex quinquefasciatus
CPIJ006372
I
0.711
CPIJ016826
Culex quinquefasciatus
CPIJ016826
I
0.947
CpipJ_CPIJ006369
Culex pipiens
CpipJ_CPIJ006369
I
0.789
CpipJ_CPIJ006372
Culex pipiens
CpipJ_CPIJ006372
I
0.711
CpipJ_CPIJ016826
Culex pipiens
CpipJ_CPIJ016826
I
0.947
runx2a
Danio rerio
ENSDARG00000040261
I
0.711
runx1
Danio rerio
ENSDARG00000087646
I
0.755
RUNX1
Dasypus novemcinctus
ENSDNOG00000015041
I
0.722
RUNX2
Homo sapiens
ENSG00000124813
D
0.701
RUNX1
Homo sapiens
ENSG00000159216
D
0.724
runx2b
Gasterosteus aculeatus
ENSGACG00000012322
I
0.711
ENSLACG00000013776
Latimeria chalumnae
ENSLACG00000013776
I
0.753
RUNX1
Monodelphis domestica
ENSMODG00000021051
I
0.711
Runx1
Mus musculus
ENSMUSG00000022952
D
0.758
Runx2
Mus musculus
ENSMUSG00000039153
D
0.701
ENSPPYG00000001714
Pongo abelii
ENSPPYG00000001714
I
0.732
RUNX1
Pteropus vampyrus
ENSPVAG00000001606
I
0.711
RUNX2
Pteropus vampyrus
ENSPVAG00000001720
I
0.739
ENSSHAG00000014782
Sarcophilus harrisii
ENSSHAG00000014782
I
0.711
ENSSSCG00000025261
Sus scrofa
ENSSSCG00000025261
I
0.724
runx3
Tetraodon nigroviridis
ENSTNIG00000016911
I
0.732
runx1
Takifugu rubripes
ENSTRUG00000012611
I
0.711
RUNX1
Tursiops truncatus
ENSTTRG00000014160
I
0.722
GI15484
Drosophila mojavensis
FBgn0138233
I
0.732
Gfo_R015914
Geospiza fortis
Gfo_R015914
I
0.745
HMEL009843
Heliconius melpomene
HMEL009843
I
0.905
HMEL014738
Heliconius melpomene
HMEL014738
I
0.729
Hsal_04635--XP_394013.3_APIME
Harpegnathos saltator
Hsal_04635--XP_394013.3_APIME
I
0.804
Hsal_12319--XP_394016.2_APIME
Harpegnathos saltator
Hsal_12319--XP_394016.2_APIME
I
0.794
ISCW023333
Ixodes scapularis
ISCW023333
I
0.809
KGM_02818
Danaus plexippus
KGM_02818
I
0.796
LCUP002652
Lucilia cuprina
LCUP002652
I
0.755
LCUP002657
Lucilia cuprina
LCUP002657
I
0.917
LDEC003023
Leptinotarsa decemlineata
LDEC003023
I
0.779
LDEC006650
Leptinotarsa decemlineata
LDEC006650
I
0.880
LDEC020505
Leptinotarsa decemlineata
LDEC020505
I
0.800
LLOJ002049
Lutzomyia longipalpis
LLOJ002049
I
0.939
MCINX000302
Melitaea cinxia
MCINX000302
I
0.784
MESCA007079
Megaselia scalaris
MESCA007079
I
0.889
Ocbimv22002042m.g
Octopus bimaculoides
Ocbimv22002042m.g
I
0.722
PPAI005889
Phlebotomus papatasi
PPAI005889
I
0.750
RPRC000026
Rhodnius prolixus
RPRC000026
I
0.851
RPRC005391
Rhodnius prolixus
RPRC005391
I
0.742
SINV13317
Solenopsis invicta
SINV13317
I
0.794
SINV13345
Solenopsis invicta
SINV13345
I
0.848
SMAR009403
Strigamia maritima
SMAR009403
I
0.848
TC006536
Tribolium castaneum
TC006536
I
0.835
YQE_12216
Dendroctonus ponderosae
YQE_12216
I
0.773