CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ADIR001029
(
Anopheles dirus
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
ADIR001029
T319737_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.727
0.727
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN
NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.727
0.727
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.727
0.727
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH
DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.727
0.727
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM
KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.727
0.727
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.727
0.727
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN
NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.727
0.727
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN
NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.727
0.727
RUNX3
M11252_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.727
0.727
RUNX3
M11253_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.727
0.727
RUNX3
M11254_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.727
0.727
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.727
0.727
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN
NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.717
0.717
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV
BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.717
0.717
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.717
0.717
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV
BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.717
0.717
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.717
0.717
Runx1
M09633_2.00
Mus musculus
NWAACCACAR
YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.717
0.717
RUNX1
M11258_2.00
Homo sapiens
ACCRCA
TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.717
0.717
RUNX1
M11259_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.717
0.717
RUNX1
M11260_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.717
0.717
RUNX1
M11261_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.717
0.717
RUNX1
M11262_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.717
0.717
RUNX1
M11263_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.717
0.717
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ADIR001029-PA
Runt
132
230
LGDFLSEHPGELIRTGSPLFVCTVLPPHWRSNKTLPVAFKVVALGDVGDGTMVTVRAGNDENYCAELRNCTAVMKNQVAKFNDLRFVGRSGRDMFIHMV
Links
Other
Runt
family TFs
Other
Anopheles dirus
TFs
105 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB007753
Anopheles albimanus
AALB007753
I
0.979
ASIS002518
Anopheles sinensis
ASIS002518
I
0.979
CpipJ_CPIJ016826
Culex pipiens
CpipJ_CPIJ016826
I
0.968
CPIJ016826
Culex quinquefasciatus
CPIJ016826
I
0.968
AQUA008686
Anopheles quadriannulatus
AQUA008686
I
0.968
AARA011332
Anopheles arabiensis
AARA011332
I
0.948
AFAF002111
Anopheles farauti
AFAF002111
I
0.939
AFUN010424
Anopheles funestus
AFUN010424
I
0.939
AAEL006160
Aedes aegypti
AAEL006160
I
0.929
AATE002063
Anopheles atroparvus
AATE002063
I
0.929
ACHR007816
Anopheles christyi
ACHR007816
I
0.929
AEPI011470
Anopheles epiroticus
AEPI011470
I
0.929
ASTEI07771
Anopheles stephensi
ASTEI07771
I
0.929
ACUA002933
Anopheles culicifacies
ACUA002933
I
0.921
PPAI010985
Phlebotomus papatasi
PPAI010985
I
0.919
MESCA007079
Megaselia scalaris
MESCA007079
I
0.911
LLOJ002049
Lutzomyia longipalpis
LLOJ002049
I
0.909
HMEL009843
Heliconius melpomene
HMEL009843
I
0.905
LCUP002657
Lucilia cuprina
LCUP002657
I
0.896
AMIN005760
Anopheles minimus
AMIN005760
I
0.893
AMEC011614
Anopheles melas
AMEC011614
I
0.885
LDEC006650
Leptinotarsa decemlineata
LDEC006650
I
0.880
RPRC000026
Rhodnius prolixus
RPRC000026
I
0.872
AMEM009849
Anopheles merus
AMEM009849
N
0.869
BGIBMGA008970
Bombyx mori
BGIBMGA008970
I
0.851
SINV13345
Solenopsis invicta
SINV13345
I
0.848
TC006536
Tribolium castaneum
TC006536
I
0.838
CLEC011123
Cimex lectularius
CLEC011123
I
0.822
ACYPI007541
Acyrthosiphon pisum
ACYPI007541
I
0.818
LDEC020505
Leptinotarsa decemlineata
LDEC020505
I
0.818
CLEC011127
Cimex lectularius
CLEC011127
I
0.808
AAEL007036
Aedes aegypti
AAEL007036
I
0.798
SMAR009403
Strigamia maritima
SMAR009403
I
0.798
ACEP16397
Atta cephalotes
ACEP16397
I
0.796
KGM_02818
Danaus plexippus
KGM_02818
I
0.796
YQE_12216
Dendroctonus ponderosae
YQE_12216
I
0.791
ACEP16391
Atta cephalotes
ACEP16391
I
0.788
MCINX000302
Melitaea cinxia
MCINX000302
I
0.788
Hsal_04635--XP_394013.3_APIME
Harpegnathos saltator
Hsal_04635--XP_394013.3_APIME
I
0.788
CpipJ_CPIJ006369
Culex pipiens
CpipJ_CPIJ006369
I
0.778
ACYPI001442
Acyrthosiphon pisum
ACYPI001442
I
0.778
CPIJ006369
Culex quinquefasciatus
CPIJ006369
I
0.778
LCUP002652
Lucilia cuprina
LCUP002652
I
0.777
Runx1
Mus musculus
ENSMUSG00000022952
D
0.774
PPAI005889
Phlebotomus papatasi
PPAI005889
I
0.772
ACEP16409
Atta cephalotes
ACEP16409
I
0.768
SINV13317
Solenopsis invicta
SINV13317
I
0.768
Cflo_03909--XP_394016.2_APIME
Camponotus floridanus
Cflo_03909--XP_394016.2_APIME
I
0.768
Hsal_12319--XP_394016.2_APIME
Harpegnathos saltator
Hsal_12319--XP_394016.2_APIME
I
0.768
AFUN005474
Anopheles funestus
AFUN005474
I
0.761
Gfo_R015914
Geospiza fortis
Gfo_R015914
I
0.755
GI15484
Drosophila mojavensis
FBgn0138233
I
0.753
RUNX2
Pteropus vampyrus
ENSPVAG00000001720
I
0.750
HMEL014738
Heliconius melpomene
HMEL014738
I
0.748
RPRC005391
Rhodnius prolixus
RPRC005391
I
0.747
LDEC003023
Leptinotarsa decemlineata
LDEC003023
I
0.747
runx1
Danio rerio
ENSDARG00000087646
I
0.745
RUNX1
Homo sapiens
ENSG00000159216
D
0.737
GA13742
Drosophila pseudoobscura
FBgn0073778
I
0.737
GF15967
Drosophila ananassae
FBgn0092990
I
0.737
GG19691
Drosophila erecta
FBgn0111893
I
0.737
GH17737
Drosophila grimshawi
FBgn0125207
I
0.737
GL15800
Drosophila persimilis
FBgn0153404
I
0.737
GM23044
Drosophila sechellia
FBgn0177912
I
0.737
GD17495
Drosophila simulans
FBgn0189047
I
0.737
GJ19245
Drosophila virilis
FBgn0206390
I
0.737
GK19810
Drosophila willistoni
FBgn0221808
I
0.737
GE17890
Drosophila yakuba
FBgn0235328
I
0.737
RunxB
Drosophila melanogaster
FBgn0259162
I
0.737
ISCW023333
Ixodes scapularis
ISCW023333
I
0.737
Sakowv30005496m.g
Saccoglossus kowalevskii
Sakowv30005496m.g
I
0.737
ENSSSCG00000025261
Sus scrofa
ENSSSCG00000025261
I
0.735
CpipJ_CPIJ006372
Culex pipiens
CpipJ_CPIJ006372
I
0.732
CPIJ006372
Culex quinquefasciatus
CPIJ006372
I
0.732
AFAF001885
Anopheles farauti
AFAF001885
N
0.728
RUNX3
Callithrix jacchus
ENSCJAG00000020815
I
0.727
ENSLACG00000013776
Latimeria chalumnae
ENSLACG00000013776
I
0.727
ENSPPYG00000001714
Pongo abelii
ENSPPYG00000001714
I
0.727
runx3
Tetraodon nigroviridis
ENSTNIG00000016911
I
0.727
tetur01g02340
Tetranychus urticae
tetur01g02340
I
0.727
XP_002939386
Xenopus tropicalis
XP_002939386
I
0.727
XP_002939387
Xenopus tropicalis
XP_002939387
I
0.727
Runx2
Mus musculus
ENSMUSG00000039153
D
0.722
RUNX1
Dasypus novemcinctus
ENSDNOG00000015041
I
0.717
RUNX1
Equus caballus
ENSECAG00000003462
I
0.717
ENSLACG00000015930
Latimeria chalumnae
ENSLACG00000015930
I
0.717
ENSMPUG00000001340
Mustela putorius furo
ENSMPUG00000001340
I
0.717
ENSTSYG00000005097
Tarsius syrichta
ENSTSYG00000005097
I
0.717
RUNX1
Tursiops truncatus
ENSTTRG00000014160
I
0.717
TC006542
Tribolium castaneum
TC006542
I
0.717
ENSP00000300305
Macaca fascicularis
ENSP00000300305
I
0.717
LLOJ002717
Lutzomyia longipalpis
LLOJ002717
I
0.717
SBAD_0000678401
Soboliphyme baturini
SBAD_0000678401
N
0.710
ENSAMXG00000000881
Astyanax mexicanus
ENSAMXG00000000881
I
0.707
ENSAMXG00000012244
Astyanax mexicanus
ENSAMXG00000012244
I
0.707
runx2a
Danio rerio
ENSDARG00000040261
I
0.707
ENSLOCG00000002744
Lepisosteus oculatus
ENSLOCG00000002744
I
0.707
RUNX1
Monodelphis domestica
ENSMODG00000021051
I
0.707
ENSOPRG00000000765
Ochotona princeps
ENSOPRG00000000765
I
0.707
RUNX1
Pteropus vampyrus
ENSPVAG00000001606
I
0.707
ENSSHAG00000014782
Sarcophilus harrisii
ENSSHAG00000014782
I
0.707
GL16499
Drosophila persimilis
FBgn0154103
I
0.707
GA22609
Drosophila pseudoobscura
FBgn0244012
I
0.707
Ocbimv22002042m.g
Octopus bimaculoides
Ocbimv22002042m.g
I
0.707
ACUA000036
Anopheles culicifacies
ACUA000036
I
0.707