chr3.CM0106.760.nc (Lotus japonicus)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 chr3.CM0106.760.nc T321298_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.816 0.816
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0106.760.nc RWP-RK 602 650

Links

Other RWP-RK family TFs
Other Lotus japonicus TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006160 Aedes aegypti AAEL006160 I 0.000
AAEL007036 Aedes aegypti AAEL007036 I 0.000
AALB007753 Anopheles albimanus AALB007753 I 0.000
AATE002063 Anopheles atroparvus AATE002063 I 0.000
ACEP16391 Atta cephalotes ACEP16391 I 0.000
ACHR007816 Anopheles christyi ACHR007816 I 0.000
ACUA002933 Anopheles culicifacies ACUA002933 I 0.000
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.000
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.000
ADIR001029 Anopheles dirus ADIR001029 I 0.000
AEPI011470 Anopheles epiroticus AEPI011470 I 0.000
AFAF002111 Anopheles farauti AFAF002111 I 0.000
AFUN010424 Anopheles funestus AFUN010424 I 0.000
AMEC011614 Anopheles melas AMEC011614 I 0.000
AMEM009849 Anopheles merus AMEM009849 N 0.000
AMIN005760 Anopheles minimus AMIN005760 I 0.000
AQUA008686 Anopheles quadriannulatus AQUA008686 I 0.000
ASIS002518 Anopheles sinensis ASIS002518 I 0.000
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.000
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I 0.000
CGI_10005366 Crassostrea gigas CGI_10005366 I 0.000
CLEC011116 Cimex lectularius CLEC011116 I 0.000
CLEC011123 Cimex lectularius CLEC011123 I 0.000
CLEC011127 Cimex lectularius CLEC011127 I 0.000
CPIJ006369 Culex quinquefasciatus CPIJ006369 I 0.000
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.000
CPIJ016826 Culex quinquefasciatus CPIJ016826 I 0.000
CpipJ_CPIJ006369 Culex pipiens CpipJ_CPIJ006369 I 0.000
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.000
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I 0.000
D917_06477 Trichinella nativa D917_06477 N 0.000
D918_01888 Trichuris suis D918_01888 N 0.000
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.000
GF15967 Drosophila ananassae FBgn0092990 I 0.000
GG19691 Drosophila erecta FBgn0111893 I 0.000
GH17737 Drosophila grimshawi FBgn0125207 I 0.000
GI15484 Drosophila mojavensis FBgn0138233 I 0.000
GL15800 Drosophila persimilis FBgn0153404 I 0.000
GM23044 Drosophila sechellia FBgn0177912 I 0.000
GD17495 Drosophila simulans FBgn0189047 I 0.000
GJ19245 Drosophila virilis FBgn0206390 I 0.000
GK19810 Drosophila willistoni FBgn0221808 I 0.000
GE17890 Drosophila yakuba FBgn0235328 I 0.000
RunxB Drosophila melanogaster FBgn0259162 I 0.000
HMEL009843 Heliconius melpomene HMEL009843 I 0.000
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.000
KGM_02818 Danaus plexippus KGM_02818 I 0.000
KGM_21075 Danaus plexippus KGM_21075 I 0.000
L798_10922 Zootermopsis nevadensis L798_10922 I 0.000
LCUP002652 Lucilia cuprina LCUP002652 I 0.000
LDEC006650 Leptinotarsa decemlineata LDEC006650 I 0.000
LDEC020505 Leptinotarsa decemlineata LDEC020505 I 0.000
MDOA013149 Musca domestica MDOA013149 I 0.000
NV10998 Nasonia vitripennis NV10998 I 0.000
Ocbimv22002042m.g Octopus bimaculoides Ocbimv22002042m.g I 0.000
PHUM333340 Pediculus humanus PHUM333340 I 0.000
RPRC000026 Rhodnius prolixus RPRC000026 I 0.000
SINV13345 Solenopsis invicta SINV13345 I 0.000
TC005566 Tribolium castaneum TC005566 I 0.000
TC005796 Tribolium castaneum TC005796 I 0.000
TC006536 Tribolium castaneum TC006536 I 0.000
TC006542 Tribolium castaneum TC006542 I 0.000
TMUE_s0043002600 Trichuris muris TMUE_s0043002600 N 0.000
YQE_12216 Dendroctonus ponderosae YQE_12216 I 0.000