CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DEAF1
(
Callithrix jacchus
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
ENSCJAG00000011996
T321642_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DEAF1
M11266_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.993
0.987
DEAF1
M11267_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.993
0.987
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000022084
SAND
197
272
SVYDSELPVRCRNISGTLYKSRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGIL
ENSCJAP00000022102
SAND
197
251
SVYDSELPVRCRNISGTLYKSRLGSGRDLKPSRCLLHLCGLLRRHDLVTVTPSGQ
ENSCJAP00000022108
SAND
183
258
SVYDSELPVRCRNISGTLYKSRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGIL
ENSCJAP00000022113
SAND
198
273
SVYDSELPVRCRNISGTLYKSRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQCLIQDGIL
Links
Other
SAND
family TFs
Other
Callithrix jacchus
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAG00000008016
Chlorocebus sabaeus
ENSCSAG00000008016
I
ZKSCAN3
Dasypus novemcinctus
ENSDNOG00000033262
I
ENSDORG00000014252
Dipodomys ordii
ENSDORG00000014252
I
ZKSCAN3
Equus caballus
ENSECAG00000013024
I
ZKSCAN3
Homo sapiens
ENSG00000189298
D
ZKSCAN3
Gorilla gorilla
ENSGGOG00000000689
I
ZKSCAN3
Macaca mulatta
ENSMMUG00000018054
I
ENSNLEG00000004558
Nomascus leucogenys
ENSNLEG00000004558
I
ZKSCAN3
Otolemur garnettii
ENSOGAG00000006596
I
ENSP00000252211
Macaca fascicularis
ENSP00000252211
I
ENSPANG00000008440
Papio anubis
ENSPANG00000008440
I
ENSPPYG00000016371
Pongo abelii
ENSPPYG00000016371
I
ZKSCAN3
Pan troglodytes
ENSPTRG00000017875
I
ENSTSYG00000004748
Tarsius syrichta
ENSTSYG00000004748
I