CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZKSCAN3
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000000689
T096059_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN3
M02923_2.00
Homo sapiens
TCGAGGYTAGMCCA
TGGKCTARCCTCGA
SELEX
Jolma et al.(2013)
ZNF306_1
0.827
1.000
ZKSCAN3
M07696_2.00
Homo sapiens
GGCTAGMCC
GGKCTAGCC
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN3.RCADE.OriginalMapping
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000009264
C2H2 ZF
296
318
HICHECGKSFAQSSGLSKHRRIH
ENSGGOP00000009264
C2H2 ZF
324
346
YECEECGKAFIGSSALVIHQRVH
ENSGGOP00000009264
C2H2 ZF
352
374
YECEECGKAFSHSSDLIKHQRTH
ENSGGOP00000009264
C2H2 ZF
380
402
YECDDCGKTFSQSCSLLEHHRIH
ENSGGOP00000009264
C2H2 ZF
408
430
YQCSMCGKAFRRSSHLLRHQRIH
ENSGGOP00000009264
C2H2 ZF
462
484
YKCNECERSFTQNTGLIEHQKIH
ENSGGOP00000009264
C2H2 ZF
490
512
YQCNACGKGFTRISYLVQHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZKSCAN3
Homo sapiens
ENSG00000189298
D
0.827
ENSNLEG00000004558
Nomascus leucogenys
ENSNLEG00000004558
I
0.827
ENSPANG00000008440
Papio anubis
ENSPANG00000008440
I
0.827
ENSPPYG00000016371
Pongo abelii
ENSPPYG00000016371
I
0.827
ZKSCAN3
Pan troglodytes
ENSPTRG00000017875
I
0.827
ZKSCAN3
Macaca mulatta
ENSMMUG00000018054
I
0.819
ENSP00000252211
Macaca fascicularis
ENSP00000252211
I
0.819
ENSCSAG00000008016
Chlorocebus sabaeus
ENSCSAG00000008016
I
0.807
ZKSCAN3
Choloepus hoffmanni
ENSCHOG00000012193
I
0.803
ZKSCAN3
Equus caballus
ENSECAG00000013024
I
0.802
ENSTSYG00000004748
Tarsius syrichta
ENSTSYG00000004748
I
0.801
ZKSCAN3
Dasypus novemcinctus
ENSDNOG00000033262
I
0.800
ZKSCAN3
Otolemur garnettii
ENSOGAG00000006596
I
0.788
ENSDORG00000014252
Dipodomys ordii
ENSDORG00000014252
I
0.770