CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo7g097160
(
Brassica oleracea
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
Bo7g097160
T323776_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo7g097160.1
Sigma 70
309
381
LIKTNLRLVLFVMNKYFQDLTNGPKFQDLCQAGMRGLITAIDRFEPKRKLRLSTYGLFWIRHAVIRSMTTSNF
Links
Other
Sigma 70
family TFs
Other
Brassica oleracea
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000165301
Angiostrongylus costaricensis
ACOC_0000165301
N
ALUE_0000981201
Ascaris lumbricoides
ALUE_0000981201
N
ASIM_0001432701
Anisakis simplex
ASIM_0001432701
N
ASU_03242
Ascaris suum
ASU_03242
N
Bm3947
Brugia malayi
Bm3947
N
DICVIV_11308
Dictyocaulus viviparus
DICVIV_11308
N
HCOI00597600
Haemonchus contortus
HCOI00597600
N
HPBE_0000675601
Heligmosomoides bakeri
HPBE_0000675601
N
L596_g17870
Steinernema carpocapsae
L596_g17870
N
L889_g25822
Steinernema feltiae
L889_g25822
N
L892_g21047
Steinernema scapterisci
L892_g21047
N
L893_g22853
Steinernema glaseri
L893_g22853
N
LOAG_02128
Loa loa
LOAG_02128
N
OESDEN_02210
Oesophagostomum dentatum
OESDEN_02210
N
OFLC_0000425901
Onchocerca flexuosa
OFLC_0000425901
N