Bo7g097160 (Brassica oleracea)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Bo7g097160 T323776_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g097160.1 Sigma 70 309 381

Links

Other Sigma 70 family TFs
Other Brassica oleracea TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra009735 Brassica rapa Bra009735 N 1.000
SIGE Arabidopsis thaliana AT5G24120 N 0.943
Bo9g013770 Brassica oleracea Bo9g013770 N 0.943
Bra026466 Brassica rapa Bra026466 N 0.943
SIGE Arabidopsis lyrata fgenesh2_kg.6__2403__AT5G24120.1 N 0.943
Thhalv10004166m.g Eutrema salsugineum Thhalv10004166m.g N 0.943
Bostr.10199s0021 Boechera stricta Bostr.10199s0021 N 0.929
Cagra.8922s0001 Capsella grandiflora Cagra.8922s0001 N 0.929
Carubv10000608m.g Capsella rubella Carubv10000608m.g N 0.929
PK06897.1 Cannabis sativa PK06897.1 N 0.870
PRUPE_ppa004259mg Prunus persica PRUPE_ppa004259mg N 0.857
PGSC0003DMG400009072 Solanum tuberosum PGSC0003DMG400009072 N 0.843
MDP0000831937 Malus domestica MDP0000831937 N 0.843
mgf001401m Mimulus guttatus mgf001401m N 0.841
SIGE Vitis vinifera VIT_16s0050g02520 N 0.826
Cla004302 Citrullus lanatus Cla004302 N 0.826
Cucsa.012950 Cucumis sativus Cucsa.012950 N 0.826
Solyc03g007370.2 Solanum lycopersicum Solyc03g007370.2 N 0.814
mgf006107m Mimulus guttatus mgf006107m N 0.814
gene13107-v1.0-hybrid Fragaria vesca gene13107-v1.0-hybrid N 0.814
Ciclev10004760m.g Citrus clementina Ciclev10004760m.g N 0.812
orange1.1g010092m.g Citrus sinensis orange1.1g010092m.g N 0.812
Pm019782 Prunus mume Pm019782 N 0.800
POPTR_0012s01430 Populus trichocarpa POPTR_0012s01430 N 0.797
Gorai.008G270500 Gossypium raimondii Gorai.008G270500 N 0.797
Lus10014934.g Linum usitatissimum Lus10014934.g N 0.797
GLYMA06G13100 Glycine max GLYMA06G13100 N 0.786
Ca_03953 Cicer arietinum Ca_03953 N 0.786
cassava7220.valid.m1 Manihot esculenta cassava7220.valid.m1 N 0.786
TCM_015349 Theobroma cacao TCM_015349 N 0.783
evm.TU.supercontig_3.54 Carica papaya evm.TU.supercontig_3.54 N 0.783
GLYMA04G41691 Glycine max GLYMA04G41691 N 0.771
30169.m006532 Ricinus communis 30169.m006532 N 0.771
SapurV1A.0377s0060 Salix purpurea SapurV1A.0377s0060 N 0.771
SapurV1A.1227s0040 Salix purpurea SapurV1A.1227s0040 N 0.768
SapurV1A.4845s0010 Salix purpurea SapurV1A.4845s0010 N 0.768
Aquca_037_00091 Aquilegia coerulea Aquca_037_00091 N 0.757
GSMUA_Achr7G24590_001 Musa acuminata GSMUA_Achr7G24590_001 N 0.754
GLYMA13G08390 Glycine max GLYMA13G08390 N 0.743
MTR_3g090900 Medicago truncatula MTR_3g090900 N 0.729
GLYMA14G31370 Glycine max GLYMA14G31370 N 0.714
cassava29286.valid.m1 Manihot esculenta cassava29286.valid.m1 N 0.710