GPLIN_000764400 (Globodera pallida)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 GPLIN_000764400 T325683_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sma-4
M02484_2.00 		Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN		 PBM
Weirauch et al.(2014)
pTH8996 		0.782 0.782
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000764400 SMAD 838 953

Links

Other SMAD family TFs
Other Globodera pallida TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
21608_YPL177C Saccharomyces mikatae 21608_YPL177C I 0.000
22207_YPL177C Saccharomyces paradoxus 22207_YPL177C I 0.000
24630_YPL177C Saccharomyces bayanus 24630_YPL177C I 0.000
8079_YGL096W Saccharomyces bayanus 8079_YGL096W I 0.000
8695_YGL096W Saccharomyces paradoxus 8695_YGL096W I 0.000
AACERI_AaceriAFL049C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL049C I 0.000
AAEL014550 Aedes aegypti AAEL014550 I 0.000
ADAC004901 Anopheles darlingi ADAC004901 I 0.000
AGOS_AFL049C Ashbya gossypii AGOS_AFL049C I 0.000
AUEXF2481DRAFT_26059 Aureobasidium subglaciale AUEXF2481DRAFT_26059 I 0.000
BAUCODRAFT_212345 Baudoinia compniacensis BAUCODRAFT_212345 I 0.000
CAGL0C01551g Candida glabrata CAGL0C01551g I 0.000
DI09_143p10 Microsporidia sp DI09_143p10 I 0.000
DOTSEDRAFT_23295 Dothistroma septosporum DOTSEDRAFT_23295 I 0.000
Ecym_2247 Eremothecium cymbalariae Ecym_2247 I 0.000
EFA78674.1 Polysphondylium pallidum EFA78674.1 N 0.000
ENSETEG00000011891 Echinops telfairi ENSETEG00000011891 I 0.000
HPODL_01870 Ogataea parapolymorpha HPODL_01870 I 0.000
KAFR_0A04370 Kazachstania africana KAFR_0A04370 I 0.000
KAFR_0G03650 Kazachstania africana KAFR_0G03650 I 0.000
KLLA0_B10450g Kluyveromyces lactis KLLA0_B10450g I 0.000
KNAG_0F02210 Kazachstania naganishii KNAG_0F02210 I 0.000
Kpol_1036p56 Vanderwaltozyma polyspora Kpol_1036p56 I 0.000
KUCA_T00004797001 Kuraishia capsulata KUCA_T00004797001 I 0.000
M437DRAFT_13662 Aureobasidium melanogenum M437DRAFT_13662 I 0.000
M438DRAFT_396225 Aureobasidium pullulans M438DRAFT_396225 I 0.000
Mycgr3G91768 Zymoseptoria tritici Mycgr3G91768 I 0.000
NCAS_0H01130 Naumovozyma castellii NCAS_0H01130 I 0.000
NDAI_0F02170 Naumovozyma dairenensis NDAI_0F02170 I 0.000
nRc.2.0.1.g06302 Romanomermis culicivorax nRc.2.0.1.g06302 I 0.000
O9G_002924 Rozella allomycis O9G_002924 I 0.000
PAS_chr3_0590 Komagataella pastoris PAS_chr3_0590 I 0.000
PTSG_05211 Salpingoeca rosetta PTSG_05211 I 0.000
Scas_Contig597.15 Saccharomyces castellii Scas_Contig597.15 I 0.000
SEPMUDRAFT_148705 Sphaerulina musiva SEPMUDRAFT_148705 I 0.000
SKUD_191904 Saccharomyces kudriavzevii SKUD_191904 I 0.000
SU7_3505 Saccharomyces arboricola SU7_3505 I 0.000
TBLA_0C03740 Tetrapisispora blattae TBLA_0C03740 I 0.000
TDEL_0F01810 Torulaspora delbrueckii TDEL_0F01810 I 0.000
TPHA_0B02580 Tetrapisispora phaffii TPHA_0B02580 I 0.000
XP_002492817.1 Pichia pastoris XP_002492817.1 I 0.000
TOS8 Saccharomyces cerevisiae YGL096W D 0.000
CUP9 Saccharomyces cerevisiae YPL177C D 0.000
ZBAI_04266 Zygosaccharomyces bailii ZBAI_04266 I 0.000
ZBAI_07775 Zygosaccharomyces bailii ZBAI_07775 I 0.000
ZYRO0G22044g Zygosaccharomyces rouxii ZYRO0G22044g I 0.000