CY34DRAFT_28710 (Suillus luteus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CY34DRAFT_28710 T327281_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.447 0.435
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.447 0.435
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.447 0.435
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.447 0.435
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.447 0.435
ste11
M11342_2.00 		Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH		 Transfac
Matys et al.(2006)
F$STE11_01 		0.442 0.348
ste11
M11343_2.00 		Schizosaccharomyces pombe Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STE11_02 		0.442 0.348
cic
M06452_2.00 		Drosophila melanogaster
YYCATTSA
TSAATGRR		 B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386 		0.434 0.333
Cic
M00195_2.00 		Mus musculus
NNTGCTGABN
NVTCAGCANN		 PBM
Badis et al.(2009)
Cic_3454 		0.428 0.319
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIK40639 Sox 2 71

Links

Other Sox family TFs
Other Suillus luteus TFs

462 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29957.m001411 Ricinus communis 29957.m001411 I 0.000
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I 0.000
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I 0.000
LBD15 Arabidopsis thaliana AT2G40470 I 0.000
Bo4g012620 Brassica oleracea Bo4g012620 I 0.000
Bo4g190210 Brassica oleracea Bo4g190210 I 0.000
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I 0.000
Bra004572 Brassica rapa Bra004572 I 0.000
Bra016992 Brassica rapa Bra016992 I 0.000
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I 0.000
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I 0.000
Carubv10024002m.g Capsella rubella Carubv10024002m.g I 0.000
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I 0.000
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I 0.000
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I 0.000
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I 0.000
GLYMA02G40080 Glycine max GLYMA02G40080 I 0.000
GLYMA14G38280 Glycine max GLYMA14G38280 I 0.000
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I 0.000
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I 0.000
LjSGA_040320.1 Lotus japonicus LjSGA_040320.1 I 0.000
LPERR05G04040 Leersia perrieri LPERR05G04040 I 0.000
Lus10009930.g Linum usitatissimum Lus10009930.g I 0.000
MDP0000278334 Malus domestica MDP0000278334 I 0.000
mgf020556m Mimulus guttatus mgf020556m I 0.000
MTR_5g075020 Medicago truncatula MTR_5g075020 I 0.000
MTR_5g083960 Medicago truncatula MTR_5g083960 I 0.000
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I 0.000
PK03716.1 Cannabis sativa PK03716.1 I 0.000
PK17019.1 Cannabis sativa PK17019.1 I 0.000
Pm019028 Prunus mume Pm019028 I 0.000
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I 0.000
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I 0.000