CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS02G0258250
(
Oryza sativa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
OS02G0258250
T331704_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS02T0258250-00
Sox
157
189
RKKPCPAYVLWCKDQWNEIKKESPDADFKEVSN
Links
Other
Sox
family TFs
Other
Oryza sativa
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AEPI010254
Anopheles epiroticus
AEPI010254
N
0.468
ALUE_0000699101
Ascaris lumbricoides
ALUE_0000699101
N
0.461
AMAM014030
Anopheles maculatus
AMAM014030
N
0.461
AMIN005634
Anopheles minimus
AMIN005634
N
0.461
ASU_00726
Ascaris suum
ASU_00726
N
0.461
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
N
0.416
BGLB013489
Biomphalaria glabrata
BGLB013489
N
0.561
CPIJ003178
Culex quinquefasciatus
CPIJ003178
N
0.468
CpipJ_CPIJ003178
Culex pipiens
CpipJ_CPIJ003178
N
0.468
D918_03887
Trichuris suis
D918_03887
N
0.449
ENSMMUP00000034886
Macaca fascicularis
ENSMMUP00000034886
N
0.442
TOX2
Sorex araneus
ENSSARG00000001080
N
0.468
ENSTGUG00000014902
Taeniopygia guttata
ENSTGUG00000014902
N
0.461
estExt_fgenesh1_pg.C_770024
Bigelowiella natans
estExt_fgenesh1_pg.C_770024
N
0.426
GPUH_0000691201
Gongylonema pulchrum
GPUH_0000691201
N
0.432
GPUH_0001196001
Gongylonema pulchrum
GPUH_0001196001
N
0.432
HMEL014563
Heliconius melpomene
HMEL014563
N
0.416
Hsal_06265--XP_624018.2_APIME
Harpegnathos saltator
Hsal_06265--XP_624018.2_APIME
N
0.461
L798_00437
Zootermopsis nevadensis
L798_00437
N
0.461
NECAME_14932
Necator americanus
NECAME_14932
N
0.463
OESDEN_18796
Oesophagostomum dentatum
OESDEN_18796
N
0.429
scaffold_600397.1
Arabidopsis lyrata
scaffold_600397.1
I
0.450
Sjc_0009880
Schistosoma japonicum
Sjc_0009880
N
0.476
TCNE_0000652201
Toxocara canis
TCNE_0000652201
N
0.461