estExt_fgenesh1_pg.C_770024 (Bigelowiella natans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 estExt_fgenesh1_pg.C_770024 T329449_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
JGI_V11_90704 Sox 115 150

Links

Other Sox family TFs
Other Bigelowiella natans TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sjc_0009880 Schistosoma japonicum Sjc_0009880 N 0.476
23225_YPR052C Saccharomyces paradoxus 23225_YPR052C I 0.476
HelroG187893 Helobdella robusta HelroG187893 N 0.470
BGLB013489 Biomphalaria glabrata BGLB013489 N 0.467
HelroG68946 Helobdella robusta HelroG68946 N 0.457
ENSTNIG00000019242 Tetraodon nigroviridis ENSTNIG00000019242 N 0.451
ENSTNIG00000011238 Tetraodon nigroviridis ENSTNIG00000011238 N 0.430
ENSORLG00000018700 Oryzias latipes ENSORLG00000018700 N 0.428
OS02G0258250 Oryza sativa OS02G0258250 N 0.426
MYCTH_2308522 Myceliophthora thermophila MYCTH_2308522 I 0.421
fgenesh1_pm.9__12 Bigelowiella natans fgenesh1_pm.9__12 N 0.416
66829 Aureococcus anophagefferens 66829 N 0.416
67048 Aureococcus anophagefferens 67048 N 0.416