67048 (Aureococcus anophagefferens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 67048 T333905_2.00 JGI (2012-Mar-17)
NCBI Gene Info:
Predicted to be involved in vacuolar proton-transporting V-type ATPase complex assembly. Predicted to be located in lysosome. Predicted to be active in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in X-linked myopathy with excessive autophagy. Orthologous to human VMA21 (vacuolar ATPase assembly factor VMA21). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
67048 Sox 2169 2225

Links

Other Sox family TFs
Other Aureococcus anophagefferens TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
66829 Aureococcus anophagefferens 66829 N 0.734
mgf012563m Mimulus guttatus mgf012563m I 0.442
HPLM_0002008001 Haemonchus placei HPLM_0002008001 N 0.440
GSPATT00035913001 Paramecium tetraurelia GSPATT00035913001 N 0.439
GSPATT00028827001 Paramecium tetraurelia GSPATT00028827001 N 0.439
EMIHUDRAFT_208774 Emiliania huxleyi EMIHUDRAFT_208774 N 0.439
pbrm1l Tetraodon nigroviridis ENSTNIG00000014731 N 0.433
pbrm1l Danio rerio ENSDARG00000077038 N 0.433
pbrm1l Takifugu rubripes ENSTRUG00000005335 N 0.433
AMIN005634 Anopheles minimus AMIN005634 N 0.432
AEPI010254 Anopheles epiroticus AEPI010254 N 0.432
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.432
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.432
AMAM014030 Anopheles maculatus AMAM014030 N 0.432
L798_00437 Zootermopsis nevadensis L798_00437 N 0.432
D918_03887 Trichuris suis D918_03887 N 0.432
EMIHUDRAFT_434306 Emiliania huxleyi EMIHUDRAFT_434306 N 0.431
GUITHDRAFT_135067 Guillardia theta GUITHDRAFT_135067 N 0.426
EuGene.0000010567 Micromonas pusilla EuGene.0000010567 N 0.426
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.425
estExt_fgenesh1_pg.C_770024 Bigelowiella natans estExt_fgenesh1_pg.C_770024 N 0.416