CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
EMIHUDRAFT_434306
(
Emiliania huxleyi
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
EMIHUDRAFT_434306
T327477_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOD30946
Sox
26
77
VKRPPGPYMIFCKEERPKIVAKNKDMSFGEVGKALGAAWGKLSEAQKAKYKK
Links
Other
Sox
family TFs
Other
Emiliania huxleyi
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EuGene.0000010567
Micromonas pusilla
EuGene.0000010567
N
0.657
est_cluster_kg.Chr_07__66__3199198:1
Micromonas sp RCC299
est_cluster_kg.Chr_07__66__3199198:1
N
0.639
EuGene.0000050349
Micromonas pusilla
EuGene.0000050349
I
0.638
PNEG_03347
Pneumocystis murina
PNEG_03347
I
0.550
BGHDH14_bgh06194
Blumeria graminis
BGHDH14_bgh06194
I
0.531
ISCW005293
Ixodes scapularis
ISCW005293
N
0.491
gw1.1.1099.1
Micromonas pusilla
gw1.1.1099.1
N
0.484
23225_YPR052C
Saccharomyces paradoxus
23225_YPR052C
I
0.471
SBAD_0000070901
Soboliphyme baturini
SBAD_0000070901
I
0.470
SELMODRAFT_29503
Selaginella moellendorffii
SELMODRAFT_29503
I
0.468
Bm12451
Brugia malayi
Bm12451
N
0.466
SELMODRAFT_8183
Selaginella moellendorffii
SELMODRAFT_8183
I
0.458
mgf012563m
Mimulus guttatus
mgf012563m
I
0.456
fgenesh1_pg.18_#_36
Coccomyxa subellipsoidea C169
fgenesh1_pg.18_#_36
N
0.450
fgeneshCV_pg.C_scaffold_18000199
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_18000199
N
0.450
Hba_16915
Heterorhabditis bacteriophora
Hba_16915
I
0.450
TCM_018380
Theobroma cacao
TCM_018380
I
0.447
scaffold_600397.1
Arabidopsis lyrata
scaffold_600397.1
I
0.446
SNAPOd2T00002710001
Oikopleura dioica
SNAPOd2T00002710001
I
0.446
Gorai.001G198900
Gossypium raimondii
Gorai.001G198900
I
0.443
CpipJ_CPIJ003178
Culex pipiens
CpipJ_CPIJ003178
N
0.440
CPIJ003178
Culex quinquefasciatus
CPIJ003178
N
0.440
L798_00437
Zootermopsis nevadensis
L798_00437
N
0.440
PHUM393920
Pediculus humanus
PHUM393920
N
0.440
AEPI010254
Anopheles epiroticus
AEPI010254
N
0.440
AMAM014030
Anopheles maculatus
AMAM014030
N
0.440
AMIN005634
Anopheles minimus
AMIN005634
N
0.440
SapurV1A.2780s0020
Salix purpurea
SapurV1A.2780s0020
I
0.437
PEQ_0000291001
Parascaris equorum
PEQ_0000291001
I
0.436
ISCW008318
Ixodes scapularis
ISCW008318
N
0.435
TELCIR_19210
Teladorsagia circumcincta
TELCIR_19210
N
0.435
TELCIR_25179
Teladorsagia circumcincta
TELCIR_25179
N
0.435
gw1.1.800.1
Fragilariopsis cylindrus
gw1.1.800.1
N
0.434
PICST_23779
Scheffersomyces stipitis
PICST_23779
I
0.433
gww1.1.1.1342.1
Pichia stipitis
gww1.1.1.1342.1
I
0.433
GLYMA01G28820
Glycine max
GLYMA01G28820
I
0.431
GLYMA03G08270
Glycine max
GLYMA03G08270
I
0.431
66829
Aureococcus anophagefferens
66829
N
0.431
67048
Aureococcus anophagefferens
67048
N
0.431
orange1.1g030283m.g
Citrus sinensis
orange1.1g030283m.g
I
0.431
DACRYDRAFT_23197
Dacryopinax sp
DACRYDRAFT_23197
I
0.430
BRADI1G29730
Brachypodium distachyon
BRADI1G29730
I
0.429
GRMZM5G834758
Zea mays
GRMZM5G834758
I
0.429
D918_03887
Trichuris suis
D918_03887
N
0.428
EMIHUDRAFT_252069
Emiliania huxleyi
EMIHUDRAFT_252069
N
0.426
Si007288m.g
Setaria italica
Si007288m.g
I
0.423
SERLA73DRAFT_131740
Serpula lacrymans
SERLA73DRAFT_131740
I
0.420
MTR_8g018100
Medicago truncatula
MTR_8g018100
N
0.418
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
0.418
estExt_fgeneshPB_pg.C_360007
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_360007
I
0.417
gw1.30.62.1
Fragilariopsis cylindrus
gw1.30.62.1
N
0.417