PPA02543 (Pristionchus pacificus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PPA02543 T332170_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PPA02543 Sox 51 119

Links

Other Sox family TFs
Other Pristionchus pacificus TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAH41216 Xenopus laevis AAH41216 N 0.436
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.577
ACEP21543 Atta cephalotes ACEP21543 N 0.435
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.532
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.577
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.577
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.577
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.577
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.532
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.532
ASU_02248 Ascaris suum ASU_02248 N 0.532
Bm7076 Brugia malayi Bm7076 N 0.557
CBG09815 Caenorhabditis briggsae CBG09815 N 0.541
CBN09141 Caenorhabditis brenneri CBN09141 N 0.503
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.435
CJA12494 Caenorhabditis japonica CJA12494 N 0.419
CRE25200 Caenorhabditis remanei CRE25200 N 0.503
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.427
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.564
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.557
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.430
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.424
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.427
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.430
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.433
smarce1 Oryzias latipes ENSORLG00000018629 N 0.427
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.427
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.427
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.426
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.433
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.433
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.427
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.577
GB50847 Apis mellifera GB50847 N 0.435
GPLIN_000239300 Globodera pallida GPLIN_000239300 N 0.444
Hba_20635 Heterorhabditis bacteriophora Hba_20635 N 0.425
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.577
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.577
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.435
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.577
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.577
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.435
ISCW021016 Ixodes scapularis ISCW021016 N 0.416
L596_g22461 Steinernema carpocapsae L596_g22461 N 0.451
L798_00593 Zootermopsis nevadensis L798_00593 N 0.435
L892_g30100 Steinernema scapterisci L892_g30100 N 0.451
L898_g375 Steinernema monticolum L898_g375 N 0.439
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.435
LOAG_01279 Loa loa LOAG_01279 N 0.557
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.442
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.518
Minc14081 Meloidogyne incognita Minc14081 N 0.442
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.557
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.563
NECAME_16117 Necator americanus NECAME_16117 N 0.577
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.429
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.557
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.557
NV11999 Nasonia vitripennis NV11999 N 0.437
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.577
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.577
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.557
PPA03165 Pristionchus pacificus PPA03165 N 0.482
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.442
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.416
scaffold237-EXSNAP2012.36 Pristionchus exspectatus scaffold237-EXSNAP2012.36 N 0.741
scaffold606-EXSNAP2012.13 Pristionchus exspectatus scaffold606-EXSNAP2012.13 N 0.482
SMAR004982 Strigamia maritima SMAR004982 N 0.422
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.532
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.442
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.577
TC007745 Tribolium castaneum TC007745 N 0.435
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.557
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.577
swsn-3 Caenorhabditis elegans WBGene00022182 N 0.541
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.557
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.557
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.435