SROB_0001231001 (Schistosoma rodhaini)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SROB_0001231001 T337021_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.424 0.338
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0001231001-mRNA-1 Sox 11 78

Links

Other Sox family TFs
Other Schistosoma rodhaini TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_02303 Schistosoma haematobium A_02303 I 0.741
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.443
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.437
DILT_0001682001 Diphyllobothrium latum DILT_0001682001 N 0.446
ECPE_0001729301 Echinostoma caproni ECPE_0001729301 N 0.437
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.424
gw1.199.74.1 Physcomitrella patens gw1.199.74.1 I 0.419
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.431
NCU02819 Neurospora crassa NCU02819 D 0.424
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.424
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.437
SCUD_0001691501 Schistosoma curassoni SCUD_0001691501 I 0.714
Sjc_0021990 Schistosoma japonicum Sjc_0021990 I 0.735
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.424
Smp_173650 Schistosoma mansoni Smp_173650 I 0.741
SMRZ_0000758001 Schistosoma margrebowiei SMRZ_0000758001 I 0.741
SMTD_0001766201 Schistosoma mattheei SMTD_0001766201 I 0.741
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.437
TRE_0001526701 Trichobilharzia regenti TRE_0001526701 N 0.573