Pavir.Ba00022 (Panicum virgatum)
Storekeeper

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04504 (DUF573) IPR007592 Pavir.Ba00022 T339079_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS03G0370250
M02494_2.00 		Oryza sativa
NNNVRYNNN
NNNRYBNNN		 PBM
Weirauch et al.(2014)
pTH8738 		0.916 0.916
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba00022.1.p Storekeeper 82 180

Links

Other Storekeeper family TFs
Other Panicum virgatum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA10 Arabidopsis thaliana AT5G06839 D
BGIOSGA019942 Oryza indica BGIOSGA019942 I
Bo3g004060 Brassica oleracea Bo3g004060 I
Bostr.13129s0288 Boechera stricta Bostr.13129s0288 I
Bostr.26959s0025 Boechera stricta Bostr.26959s0025 I
Cagra.8005s0020 Capsella grandiflora Cagra.8005s0020 I
Carubv10003744m.g Capsella rubella Carubv10003744m.g I
Ciclev10031441m.g Citrus clementina Ciclev10031441m.g I
Eucgr.G02341 Eucalyptus grandis Eucgr.G02341 I
Eucgr.K01822 Eucalyptus grandis Eucgr.K01822 I
F775_16855 Aegilops tauschii F775_16855 I
F775_24386 Aegilops tauschii F775_24386 I
PAN Arabidopsis lyrata fgenesh2_kg.2__1120__AT1G68640.1 I
TGA10 Arabidopsis lyrata fgenesh2_kg.6__632__AT5G06839.2 I
GLYMA03G29825 Glycine max GLYMA03G29825 I
GLYMA19G32715 Glycine max GLYMA19G32715 I
GRMZM2G029979 Zea mays GRMZM2G029979 I
GSMUA_Achr11G14570_001 Musa acuminata GSMUA_Achr11G14570_001 I
LPERR05G14450 Leersia perrieri LPERR05G14450 I
MLOC_58614 Hordeum vulgare MLOC_58614 I
OB05G26080 Oryza brachyantha OB05G26080 I
OBART05G18270 Oryza barthii OBART05G18270 I
OGLUM05G19350 Oryza glumaepatula OGLUM05G19350 I
OLONG_005656 Oryza longistaminata OLONG_005656 I
OMERI05G15750 Oryza meridionalis OMERI05G15750 I
ONIVA05G19180 Oryza nivara ONIVA05G19180 I
orange1.1g018357m.g Citrus sinensis orange1.1g018357m.g I
ORGLA05G0158500 Oryza glaberrima ORGLA05G0158500 I
ORUFI05G19430 Oryza rufipogon ORUFI05G19430 I
OS05G0443900 Oryza sativa OS05G0443900 I
Pavir.Hb01807 Panicum virgatum Pavir.Hb01807 I
PDK_20s1405291g002 Phoenix dactylifera PDK_20s1405291g002 I
PDK_20s1736691g001 Phoenix dactylifera PDK_20s1736691g001 I
PGSC0003DMG400011430 Solanum tuberosum PGSC0003DMG400011430 I
PGSC0003DMG400023678 Solanum tuberosum PGSC0003DMG400023678 I
Solyc10g078670.1 Solanum lycopersicum Solyc10g078670.1 I
Solyc10g080410.1 Solanum lycopersicum Solyc10g080410.1 I
Solyc11g068370.1 Solanum lycopersicum Solyc11g068370.1 I
Thhalv10014032m.g Eutrema salsugineum Thhalv10014032m.g I
Traes_1AL_3B659AABA Triticum aestivum Traes_1AL_3B659AABA I
Traes_1DS_0CFC1995D Triticum aestivum Traes_1DS_0CFC1995D I
Traes_6AS_9916DDE4D Triticum aestivum Traes_6AS_9916DDE4D I
Traes_6BS_65CDD608F Triticum aestivum Traes_6BS_65CDD608F I
Traes_6DS_FD90D1145 Triticum aestivum Traes_6DS_FD90D1145 I