MTR_3g065900 (Medicago truncatula)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 MTR_3g065900 T342721_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
KEH34616 TBP 22 104
KEH34616 TBP 112 195
KEH34617 TBP 36 100
KEH34617 TBP 109 192

Links

Other TBP family TFs
Other Medicago truncatula TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29950.m001154 Ricinus communis 29950.m001154 I 0.719
AMTR_s00047p00131170 Amborella trichopoda AMTR_s00047p00131170 I 0.726
AMTR_s00064p00125250 Amborella trichopoda AMTR_s00064p00125250 I 0.719
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I 0.748
BGIOSGA013244 Oryza indica BGIOSGA013244 I 0.721
BGIOSGA037671 Oryza indica BGIOSGA037671 I 0.719
Bo3g185290 Brassica oleracea Bo3g185290 I 0.707
Bo6g051360 Brassica oleracea Bo6g051360 I 0.701
Bostr.6758s0027 Boechera stricta Bostr.6758s0027 I 0.701
Bra011920 Brassica rapa Bra011920 I 0.701
Bra030855 Brassica rapa Bra030855 I 0.707
BRADI1G13220 Brachypodium distachyon BRADI1G13220 I 0.719
BRADI4G01150 Brachypodium distachyon BRADI4G01150 I 0.711
Cagra.0001s0028 Capsella grandiflora Cagra.0001s0028 I 0.701
Carubv10010337m.g Capsella rubella Carubv10010337m.g I 0.701
cassava22625.valid.m1 Manihot esculenta cassava22625.valid.m1 I 0.719
cassava35684.valid.m1 Manihot esculenta cassava35684.valid.m1 I 0.719
Ca_13293 Cicer arietinum Ca_13293 N 0.766
Ciclev10022324m.g Citrus clementina Ciclev10022324m.g I 0.719
Cucsa.142180 Cucumis sativus Cucsa.142180 I 0.719
estExt_Genewise1.C_2460019 Physcomitrella patens estExt_Genewise1.C_2460019 I 0.701
Eucgr.J01752 Eucalyptus grandis Eucgr.J01752 I 0.725
Eucgr.K01483 Eucalyptus grandis Eucgr.K01483 I 0.725
F775_26897 Aegilops tauschii F775_26897 I 0.703
gene01591-v1.0-hybrid Fragaria vesca gene01591-v1.0-hybrid I 0.713
GLYMA03G04500 Glycine max GLYMA03G04500 I 0.725
GLYMA09G41330 Glycine max GLYMA09G41330 I 0.730
GLYMA16G25450 Glycine max GLYMA16G25450 I 0.725
GLYMA18G44460 Glycine max GLYMA18G44460 I 0.719
GLYMA19G28780 Glycine max GLYMA19G28780 I 0.725
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I 0.724
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I 0.719
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I 0.719
GRMZM2G149238 Zea mays GRMZM2G149238 I 0.713
GRMZM2G161418 Zea mays GRMZM2G161418 I 0.717
GSMUA_Achr1G26830_001 Musa acuminata GSMUA_Achr1G26830_001 I 0.707
GSMUA_Achr5G08990_001 Musa acuminata GSMUA_Achr5G08990_001 I 0.713
GSMUA_Achr6G23210_001 Musa acuminata GSMUA_Achr6G23210_001 I 0.713
GSMUA_Achr7G01480_001 Musa acuminata GSMUA_Achr7G01480_001 I 0.707
LjT45I18.100.nd Lotus japonicus LjT45I18.100.nd I 0.725
LPERR12G14180 Leersia perrieri LPERR12G14180 I 0.725
Lus10002634.g Linum usitatissimum Lus10002634.g I 0.719
Lus10020260.g Linum usitatissimum Lus10020260.g I 0.719
MDP0000289755 Malus domestica MDP0000289755 I 0.711
mgf009543m Mimulus guttatus mgf009543m I 0.707
mgf012506m Mimulus guttatus mgf012506m I 0.705
MLOC_44969 Hordeum vulgare MLOC_44969 I 0.719
MTR_3g066070 Medicago truncatula MTR_3g066070 N 0.918
MTR_4g029010 Medicago truncatula MTR_4g029010 I 0.701
MTR_7g072580 Medicago truncatula MTR_7g072580 I 0.725
OB03G33300 Oryza brachyantha OB03G33300 I 0.725
OB03G33310 Oryza brachyantha OB03G33310 I 0.713
OBART03G28150 Oryza barthii OBART03G28150 I 0.725
OBART12G16890 Oryza barthii OBART12G16890 I 0.725
OGLUM03G28780 Oryza glumaepatula OGLUM03G28780 I 0.725
OGLUM12G18540 Oryza glumaepatula OGLUM12G18540 I 0.725
OLONG_010453 Oryza longistaminata OLONG_010453 I 0.767
OMERI03G24790 Oryza meridionalis OMERI03G24790 I 0.725
OMERI11G15350 Oryza meridionalis OMERI11G15350 I 0.725
ONIVA03G29180 Oryza nivara ONIVA03G29180 I 0.725
ONIVA12G15220 Oryza nivara ONIVA12G15220 I 0.721
OPUNC01G04710 Oryza punctata OPUNC01G04710 I 0.744
OPUNC03G25660 Oryza punctata OPUNC03G25660 I 0.725
OPUNC12G15370 Oryza punctata OPUNC12G15370 I 0.725
orange1.1g029591m.g Citrus sinensis orange1.1g029591m.g I 0.711
ORGLA03G0260300 Oryza glaberrima ORGLA03G0260300 I 0.725
ORGLA06G0285000 Oryza glaberrima ORGLA06G0285000 I 0.757
ORGLA12G0202200 Oryza glaberrima ORGLA12G0202200 I 0.725
ORUFI03G29280 Oryza rufipogon ORUFI03G29280 I 0.721
ORUFI12G18750 Oryza rufipogon ORUFI12G18750 I 0.721
TBP2 Oryza sativa OS03G0657000 I 0.725
OS12G0580300 Oryza sativa OS12G0580300 I 0.725
Pavir.Ib04166 Panicum virgatum Pavir.Ib04166 I 0.724
Pavir.J18057 Panicum virgatum Pavir.J18057 I 0.706
Pavir.J26398 Panicum virgatum Pavir.J26398 I 0.761
PDK_20s1328661g002 Phoenix dactylifera PDK_20s1328661g002 I 0.764
PDK_20s1715251g002 Phoenix dactylifera PDK_20s1715251g002 I 0.719
PK11932.1 Cannabis sativa PK11932.1 I 0.718
PK25605.1 Cannabis sativa PK25605.1 I 0.720
Pm000066 Prunus mume Pm000066 I 0.711
POPTR_0013s05580 Populus trichocarpa POPTR_0013s05580 I 0.701
POPTR_0019s04890 Populus trichocarpa POPTR_0019s04890 I 0.701
PRUPE_ppa011711mg Prunus persica PRUPE_ppa011711mg I 0.713
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I 0.705
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I 0.719
Sb01g012880 Sorghum bicolor Sb01g012880 I 0.719
Sb08g022273 Sorghum bicolor Sb08g022273 I 0.725
SELMODRAFT_163230 Selaginella moellendorffii SELMODRAFT_163230 I 0.701
SELMODRAFT_270329 Selaginella moellendorffii SELMODRAFT_270329 I 0.701
Si023295m.g Setaria italica Si023295m.g I 0.724
Si038805m.g Setaria italica Si038805m.g I 0.719
Solyc01g028930.2 Solanum lycopersicum Solyc01g028930.2 I 0.713
TCM_026453 Theobroma cacao TCM_026453 I 0.711
Thhalv10011790m.g Eutrema salsugineum Thhalv10011790m.g I 0.707
Traes_4AL_D48452758 Triticum aestivum Traes_4AL_D48452758 I 0.715
Traes_4BS_4F52653D8 Triticum aestivum Traes_4BS_4F52653D8 I 0.719
Traes_4DS_700213C0B Triticum aestivum Traes_4DS_700213C0B I 0.719
TRIUR3_13880 Triticum urartu TRIUR3_13880 I 0.711
TRIUR3_20012 Triticum urartu TRIUR3_20012 I 0.703
VIT_06s0004g00180 Vitis vinifera VIT_06s0004g00180 I 0.725