ACOC_0000447501 (Angiostrongylus costaricensis)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 ACOC_0000447501 T343395_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.732 0.732
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.732 0.732
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.732 0.732
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.732 0.732
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.732 0.732
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.732 0.732
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.732 0.732
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.732 0.732
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.732 0.732
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.732 0.732
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.709 0.709
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.709 0.709
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.709 0.709
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0000447501-mRNA-1 TBP 1 43
ACOC_0000447501-mRNA-1 TBP 51 134

Links

Other TBP family TFs
Other Angiostrongylus costaricensis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP14716 Atta cephalotes ACEP14716 I 0.732
ANCDUO_08400 Ancylostoma duodenale ANCDUO_08400 I 0.873
ANCDUO_13676 Ancylostoma duodenale ANCDUO_13676 I 0.787
Cflo_04179--XP_623088.1_APIME Camponotus floridanus Cflo_04179--XP_623088.1_APIME I 0.732
DACRYDRAFT_75233 Dacryopinax sp DACRYDRAFT_75233 I 0.709
DAPPUDRAFT_194512 Daphnia pulex DAPPUDRAFT_194512 I 0.748
ENSAPLG00000006951 Anas platyrhynchos ENSAPLG00000006951 I 0.740
TBPL2 Cavia porcellus ENSCPOG00000006151 I 0.732
ENSECAG00000008702 Equus caballus ENSECAG00000008702 I 0.740
TBPL2 Gallus gallus ENSGALG00000012145 I 0.756
TBPL2 Meleagris gallopavo ENSMGAG00000013657 I 0.756
ENSOANG00000022637 Ornithorhynchus anatinus ENSOANG00000022637 I 0.778
tbp Oryzias latipes ENSORLG00000010757 I 0.724
e_gwh1.1.1.994.1 Pichia stipitis e_gwh1.1.1.994.1 I 0.701
GI18943 Drosophila mojavensis FBgn0141682 I 0.732
GB47180 Apis mellifera GB47180 I 0.740
HMEL016424 Heliconius melpomene HMEL016424 I 0.740
HPBE_0000236501 Heligmosomoides bakeri HPBE_0000236501 I 0.841
HPLM_0001046201 Haemonchus placei HPLM_0001046201 I 0.858
KGM_04261 Danaus plexippus KGM_04261 I 0.740
L596_g25394 Steinernema carpocapsae L596_g25394 I 0.756
M408DRAFT_329006 Serendipita vermifera M408DRAFT_329006 I 0.701
MCINX007129 Melitaea cinxia MCINX007129 I 0.740
NECAME_12365 Necator americanus NECAME_12365 I 0.874
OESDEN_24315 Oesophagostomum dentatum OESDEN_24315 N 0.810
PHUM533080 Pediculus humanus PHUM533080 I 0.740
PICST_38880 Scheffersomyces stipitis PICST_38880 I 0.701
PIIN_00750 Piriformospora indica PIIN_00750 I 0.701
PV09_01314 Verruconis gallopava PV09_01314 I 0.701
PV10_01351 Exophiala mesophila PV10_01351 I 0.701
SKUD_163604 Saccharomyces kudriavzevii SKUD_163604 I 0.709
SOCG_04191 Schizosaccharomyces octosporus SOCG_04191 I 0.701
tbp1 Schizosaccharomyces pombe SPAC29E6.08 I 0.701
SPOG_00351 Schizosaccharomyces cryophilus SPOG_00351 I 0.701
SU7_0942 Saccharomyces arboricola SU7_0942 I 0.709
TriadG22173 Trichoplax adhaerens TriadG22173 I 0.717
TriadG50358 Trichoplax adhaerens TriadG50358 I 0.709
tbpl2.L Xenopus laevis XB-GENE-876147 I 0.740