PK29658.1 (Cannabis sativa)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 PK29658.1 T345114_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.912 0.466
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.907 0.448
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.905 0.448
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.905 0.448
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.905 0.448
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.904 0.440
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.873 0.397
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.856 0.379
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.856 0.388
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.855 0.379
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.830 0.397
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.824 0.362
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.824 0.362
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK29658.1 TCP 33 148

Links

Other TCP family TFs
Other Cannabis sativa TFs

337 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13522_YKL038W Saccharomyces mikatae 13522_YKL038W I
13626_YKL038W Saccharomyces paradoxus 13626_YKL038W I
14629_YKL038W Saccharomyces bayanus 14629_YKL038W I
AACERI_AaceriAGL083W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL083W I
AGOS_AGL083W Ashbya gossypii AGOS_AGL083W I
CAGL0L01903g Candida glabrata CAGL0L01903g I
KLLA0_F25630g Kluyveromyces lactis KLLA0_F25630g N
KNAG_0A07100 Kazachstania naganishii KNAG_0A07100 I
Kpol_1002p5 Vanderwaltozyma polyspora Kpol_1002p5 I
NCAS_0A04750 Naumovozyma castellii NCAS_0A04750 I
NDAI_0K01800 Naumovozyma dairenensis NDAI_0K01800 I
Scas_Contig625.5 Saccharomyces castellii Scas_Contig625.5 I
SU7_2014 Saccharomyces arboricola SU7_2014 I
TDEL_0B06360 Torulaspora delbrueckii TDEL_0B06360 I
TPHA_0C04280 Tetrapisispora phaffii TPHA_0C04280 I
RGT1 Saccharomyces cerevisiae YKL038W D
ZBAI_03469 Zygosaccharomyces bailii ZBAI_03469 I
ZBAI_08469 Zygosaccharomyces bailii ZBAI_08469 I
ZYRO0E05676g Zygosaccharomyces rouxii ZYRO0E05676g I