Eucgr.K01091 (Eucalyptus grandis)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 Eucgr.K01091 T350625_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K01091.1 Whirly 65 210
Eucgr.K01091.2 Whirly 65 206
Eucgr.K01091.3 Whirly 65 201
Eucgr.K01091.4 Whirly 65 201
Eucgr.K01091.5 Whirly 22 158

Links

Other Whirly family TFs
Other Eucalyptus grandis TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WHY2 Arabidopsis thaliana AT1G71260 N 0.765
Bostr.10273s0220 Boechera stricta Bostr.10273s0220 N 0.743
Cagra.0147s0016 Capsella grandiflora Cagra.0147s0016 N 0.743
Carubv10020880m.g Capsella rubella Carubv10020880m.g N 0.750
cassava24783.valid.m1 Manihot esculenta cassava24783.valid.m1 N 0.801
chr1.LjT14G19.90.nc Lotus japonicus chr1.LjT14G19.90.nc N 0.772
evm.TU.supercontig_249.9 Carica papaya evm.TU.supercontig_249.9 N 0.772
GLYMA03G41270 Glycine max GLYMA03G41270 N 0.721
GLYMA19G43880 Glycine max GLYMA19G43880 N 0.754
Gorai.004G266000 Gossypium raimondii Gorai.004G266000 N 0.706
Lus10017892.g Linum usitatissimum Lus10017892.g N 0.765
Lus10035067.g Linum usitatissimum Lus10035067.g N 0.765
MDP0000168614 Malus domestica MDP0000168614 N 0.809
mgf015710m Mimulus guttatus mgf015710m N 0.816
MLOC_19666 Hordeum vulgare MLOC_19666 N 0.733
MTR_7g116270 Medicago truncatula MTR_7g116270 N 0.784
orange1.1g026312m.g Citrus sinensis orange1.1g026312m.g N 0.754
PGSC0003DMG400022930 Solanum tuberosum PGSC0003DMG400022930 N 0.772
PK20247.1 Cannabis sativa PK20247.1 N 0.750
Pm022821 Prunus mume Pm022821 N 0.801
ATWHY2 Populus trichocarpa POPTR_0003s04700 N 0.795
PRUPE_ppa011529mg Prunus persica PRUPE_ppa011529mg N 0.801
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N 0.824
ATWHY2 Arabidopsis lyrata scaffold_202038.1 N 0.772
Solyc11g044750.1 Solanum lycopersicum Solyc11g044750.1 N 0.787
TCM_035992 Theobroma cacao TCM_035992 N 0.735
Thhalv10019058m.g Eutrema salsugineum Thhalv10019058m.g N 0.772
ATWHY2 Vitis vinifera VIT_18s0089g00900 N 0.748